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RNU5F-6P RNA, U5F small nuclear 6, pseudogene [ Homo sapiens (human) ]

Gene ID: 100873833, updated on 10-Dec-2024

Summary

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Official Symbol
RNU5F-6Pprovided by HGNC
Official Full Name
RNA, U5F small nuclear 6, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:42523
See related
Ensembl:ENSG00000199849 AllianceGenome:HGNC:42523
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU5F-6P in Genome Data Viewer
Location:
1q23.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (164351273..164351388)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (163697047..163697162)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (164320510..164320625)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904671 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_629 Neighboring gene NANOG hESC enhancer GRCh37_chr1:164023584-164024085 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_715 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:164185857-164186356 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_757 Neighboring gene NMNAT1 pseudogene 2 Neighboring gene high mobility group box 3 pseudogene 6 Neighboring gene uncharacterized LOC124904759

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_032613.1 

    Range
    101..216
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    164351273..164351388
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    163697047..163697162
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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