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RNA5SP426 RNA, 5S ribosomal pseudogene 426 [ Homo sapiens (human) ]

Gene ID: 100873677, updated on 10-Dec-2024

Summary

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Official Symbol
RNA5SP426provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 426provided by HGNC
Primary source
HGNC:HGNC:43326
See related
Ensembl:ENSG00000199771 AllianceGenome:HGNC:43326
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S426
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Genomic context

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See RNA5SP426 in Genome Data Viewer
Location:
16q12.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (50869455..50869575, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (56667161..56667287, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (50903366..50903486, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene CYLD lysine 63 deubiquitinase Neighboring gene CYLD antisense RNA 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:50843053-50844052 Neighboring gene long intergenic non-protein coding RNA 2168 Neighboring gene VISTA enhancer hs162 Neighboring gene long intergenic non-protein coding RNA 2128 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:50912801-50913712 Neighboring gene MPRA-validated peak2593 silencer Neighboring gene uncharacterized LOC124903775 Neighboring gene VISTA enhancer hs79 Neighboring gene uncharacterized LOC107984903 Neighboring gene long intergenic non-protein coding RNA 2127

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • RNA, 5S ribosomal 426

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033626.1 

    Range
    101..221
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    50869455..50869575 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    56667161..56667287 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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