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RNA5SP117 RNA, 5S ribosomal pseudogene 117 [ Homo sapiens (human) ]

Gene ID: 100873387, updated on 29-Mar-2023

Summary

Official Symbol
RNA5SP117provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 117provided by HGNC
Primary source
HGNC:HGNC:42915
See related
Ensembl:ENSG00000202164 AllianceGenome:HGNC:42915
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S117
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Genomic context

See RNA5SP117 in Genome Data Viewer
Location:
2q34
Annotation release Status Assembly Chr Location
RS_2023_03 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (208920547..208920664, complement)
RS_2023_03 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (209400410..209400527, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (209785271..209785388, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101927960 Neighboring gene uncharacterized LOC105373857 Neighboring gene uncharacterized LOC105373856 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:209736923-209738122 Neighboring gene NANOG hESC enhancer GRCh37_chr2:209853607-209854108 Neighboring gene NANOG hESC enhancer GRCh37_chr2:209948524-209949085 Neighboring gene heat shock protein family A (Hsp70) member 8 pseudogene 6 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:210002645-210003334 Neighboring gene crystallin gamma F, pseudogene

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033556.1 

    Range
    101..218
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    208920547..208920664 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    209400410..209400527 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)