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Gm21188 predicted gene, 21188 [ Mus musculus (house mouse) ]

Gene ID: 100861753, updated on 14-Feb-2023

Summary

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Official Symbol
Gm21188provided by MGI
Official Full Name
predicted gene, 21188provided by MGI
Primary source
MGI:MGI:5434543
See related
Ensembl:ENSMUSG00000095609 AllianceGenome:MGI:5434543
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Ubiquitous expression in lung adult (RPKM 7.1), mammary gland adult (RPKM 7.1) and 28 other tissues See more
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Genomic context

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See Gm21188 in Genome Data Viewer
Location:
13 D2.3; 13
Exon count:
7
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (120496140..120513740, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (120034604..120052204, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 36161 Neighboring gene predicted gene, 22108 Neighboring gene predicted gene, 36079 Neighboring gene predicted gene, 24798 Neighboring gene predicted gene, 31544 Neighboring gene predicted gene, 41081 Neighboring gene predicted gene, 21378

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
  5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
predicted gene, 21188; uncharacterized protein LOC100861753
Names
annexin-2 receptor-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001302966.1 → NP_001289895.1  uncharacterized protein LOC100861753

    See identical proteins and their annotated locations for NP_001289895.1

    Status: VALIDATED

    Source sequence(s)
    AC238811, AK137614
    Consensus CDS
    CCDS79248.1
    UniProtKB/TrEMBL
    Q3T9V6
    Related
    ENSMUSP00000153701.2, ENSMUST00000224713.2
    Conserved Domains (1) summary
    pfam15721
    Location:2 → 190
    ANXA2R; Annexin-2 receptor

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    120496140..120513740 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011244608.3 → XP_011242910.1  predicted gene, 21188 isoform X1

    See identical proteins and their annotated locations for XP_011242910.1

    UniProtKB/TrEMBL
    Q3T9V6
    Conserved Domains (1) summary
    pfam15721
    Location:2 → 190
    ANXA2R; Annexin-2 receptor

  2. XM_036157806.1 → XP_036013699.1  predicted gene, 21188 isoform X1

    UniProtKB/TrEMBL
    Q3T9V6
    Conserved Domains (1) summary
    pfam15721
    Location:2 → 190
    ANXA2R; Annexin-2 receptor
Nucleotide Protein Strain
Heading Accession and Version

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