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RNF43 ring finger protein 43 [ Gallus gallus (chicken) ]

Gene ID: 100857874, updated on 3-Apr-2024

Summary

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Symbol
RNF43provided by CGNC
Full Name
ring finger protein 43provided by CGNC
Primary source
CGNC:66014
See related
Ensembl:ENSGALG00010029599
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See RNF43 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (1048878..1105683, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (778664..835466, complement)

Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107054776 Neighboring gene microRNA 142 Neighboring gene SPT4 homolog, DSIF elongation factor subunit Neighboring gene translation initiation factor IF-2-like Neighboring gene heat shock transcription factor 5 Neighboring gene myotubularin related protein 4 Neighboring gene microRNA 1698-1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables frizzled binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Wnt receptor catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RING finger protein 43; E3 ubiquitin-protein ligase RNF43

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1048878..1105683 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003642379.6 → XP_003642427.4  E3 ubiquitin-protein ligase RNF43 isoform X1

    UniProtKB/TrEMBL
    A0A8V1ADZ1, A0A8V1AL32
    Related
    ENSGALP00010044241.1, ENSGALT00010071551.1
    Conserved Domains (1) summary
    cd16798
    Location:262 → 308
    RING-H2_RNF43; RING finger, H2 subclass, found in RING finger protein 43 (RNF43) and similar proteins

  2. XM_025142103.3 → XP_024997871.2  E3 ubiquitin-protein ligase RNF43 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AL32
    Conserved Domains (1) summary
    cl17238
    Location:223 → 256
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    778664..835466 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046930388.1 → XP_046786344.1  E3 ubiquitin-protein ligase RNF43 isoform X1

  2. XM_040687586.2 → XP_040543520.1  E3 ubiquitin-protein ligase RNF43 isoform X2

    UniProtKB/TrEMBL
    A0A8V1AL32
    Conserved Domains (1) summary
    cl17238
    Location:223 → 256
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

  3. XM_040687585.2 → XP_040543519.1  E3 ubiquitin-protein ligase RNF43 isoform X1

    UniProtKB/TrEMBL
    A0A8V1AL32
    Conserved Domains (1) summary
    cd16798
    Location:262 → 308
    RING-H2_RNF43; RING finger, H2 subclass, found in RING finger protein 43 (RNF43) and similar proteins
Nucleotide Protein
Heading Accession and Version

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