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HSBP1 heat shock factor binding protein 1 [ Canis lupus familiaris (dog) ]

Gene ID: 100856736, updated on 8-Mar-2024

Summary

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Official Symbol
HSBP1provided by VGNC
Official Full Name
heat shock factor binding protein 1provided by VGNC
Primary source
VGNC:VGNC:41795
See related
Ensembl:ENSCAFG00845016653
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 5 NC_051809.1 (68773360..68777530, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 5 NC_006587.4 (68488788..68492964, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 5 NC_049226.1 (68973475..68977644, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 5 NC_049265.1 (68720849..68725018, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 5 NC_049746.1 (68557358..68561548, complement)

Chromosome 5 - NC_051809.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119872033 Neighboring gene uncharacterized LOC106558854 Neighboring gene malonyl-CoA decarboxylase Neighboring gene H/ACA ribonucleoprotein complex subunit DKC1-like Neighboring gene cadherin 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure-function analysis of the heat shock factor-binding protein reveals a protein composed solely of a highly conserved and dynamic coiled-coil trimerization domain. Tai LJ, et al. J Biol Chem, 2002 Jan 4. PMID 11679589

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular heat acclimation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heat shock factor-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051809.1 Reference ROS_Cfam_1.0

    Range
    68773360..68777530 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038666914.1 → XP_038522842.1  heat shock factor-binding protein 1

    UniProtKB/TrEMBL
    A0A8C0LW68, A0A8I3NR49
    Related
    ENSCAFP00845023183.1, ENSCAFT00845029511.1
    Conserved Domains (1) summary
    pfam06825
    Location:10 → 60
    HSBP1; Heat shock factor binding protein 1

  2. XM_038666915.1 → XP_038522843.1  heat shock factor-binding protein 1

    UniProtKB/TrEMBL
    A0A8C0LW68, A0A8I3NR49
    Conserved Domains (1) summary
    pfam06825
    Location:10 → 60
    HSBP1; Heat shock factor binding protein 1

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049265.1 Alternate UMICH_Zoey_3.1

    Range
    68720849..68725018 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038476994.1 → XP_038332922.1  heat shock factor-binding protein 1

    Conserved Domains (1) summary
    pfam06825
    Location:10 → 60
    HSBP1; Heat shock factor binding protein 1

  2. XM_038476995.1 → XP_038332923.1  heat shock factor-binding protein 1

    Conserved Domains (1) summary
    pfam06825
    Location:10 → 60
    HSBP1; Heat shock factor binding protein 1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049746.1 Alternate UNSW_CanFamBas_1.0

    Range
    68557358..68561548 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038602300.1 → XP_038458228.1  heat shock factor-binding protein 1

    Conserved Domains (1) summary
    pfam06825
    Location:10 → 60
    HSBP1; Heat shock factor binding protein 1

  2. XM_038602301.1 → XP_038458229.1  heat shock factor-binding protein 1

    Conserved Domains (1) summary
    pfam06825
    Location:10 → 60
    HSBP1; Heat shock factor binding protein 1

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049226.1 Alternate UU_Cfam_GSD_1.0

    Range
    68973475..68977644 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038538173.1 → XP_038394101.1  heat shock factor-binding protein 1

    UniProtKB/TrEMBL
    A0A8C0LW68, A0A8I3NR49
    Conserved Domains (1) summary
    pfam06825
    Location:10 → 60
    HSBP1; Heat shock factor binding protein 1

  2. XM_038538174.1 → XP_038394102.1  heat shock factor-binding protein 1

    UniProtKB/TrEMBL
    A0A8C0LW68, A0A8I3NR49
    Conserved Domains (1) summary
    pfam06825
    Location:10 → 60
    HSBP1; Heat shock factor binding protein 1

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006587.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    68488788..68492964 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003639067.3 → XP_003639115.1  heat shock factor-binding protein 1

    See identical proteins and their annotated locations for XP_003639115.1

    UniProtKB/TrEMBL
    A0A8C0LW68, A0A8I3NR49
    Conserved Domains (1) summary
    pfam06825
    Location:10 → 60
    HSBP1; Heat shock factor binding protein 1

  2. XM_005620651.1 → XP_005620708.1  heat shock factor-binding protein 1

    See identical proteins and their annotated locations for XP_005620708.1

    UniProtKB/TrEMBL
    A0A8C0LW68, A0A8I3NR49
    Conserved Domains (1) summary
    pfam06825
    Location:10 → 60
    HSBP1; Heat shock factor binding protein 1
Nucleotide Protein
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