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CALHM1 calcium homeostasis modulator 1 [ Canis lupus familiaris (dog) ]

Gene ID: 100855454, updated on 8-Mar-2024

Summary

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Official Symbol
CALHM1provided by VGNC
Official Full Name
calcium homeostasis modulator 1provided by VGNC
Primary source
VGNC:VGNC:38667
See related
Ensembl:ENSCAFG00845027760
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human all
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Genomic context

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See CALHM1 in Genome Data Viewer
Location:
chromosome: 28
Exon count:
2
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 28 NC_051832.1 (16297314..16301591, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 28 NC_006610.4 (15993041..15997318, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 28 NC_049249.1 (16012767..16017044, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 28 NC_049288.1 (15846318..15850594, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 28 NC_049769.1 (15874149..15878424, complement)

Chromosome 28 - NC_051832.1Genomic Context describing neighboring genes Neighboring gene programmed cell death 11 Neighboring gene calcium homeostasis modulator family member 2 Neighboring gene calcium homeostasis modulator 3 Neighboring gene uncharacterized LOC119866578

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monoatomic cation channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium homeostasis modulator protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051832.1 Reference ROS_Cfam_1.0

    Range
    16297314..16301591 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038440461.1 → XP_038296389.1  calcium homeostasis modulator protein 1

    UniProtKB/TrEMBL
    A0A8C0PNB1, A0A8C0QYN0, A0A8I3Q1Y0
    Related
    ENSCAFP00845038429.1, ENSCAFT00845048986.1
    Conserved Domains (1) summary
    pfam14798
    Location:2 → 254
    Ca_hom_mod; Calcium homeostasis modulator

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049288.1 Alternate UMICH_Zoey_3.1

    Range
    15846318..15850594 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038515082.1 → XP_038371010.1  calcium homeostasis modulator protein 1

    Conserved Domains (1) summary
    pfam14798
    Location:2 → 254
    Ca_hom_mod; Calcium homeostasis modulator

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049769.1 Alternate UNSW_CanFamBas_1.0

    Range
    15874149..15878424 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038642870.1 → XP_038498798.1  calcium homeostasis modulator protein 1

    Conserved Domains (1) summary
    pfam14798
    Location:2 → 254
    Ca_hom_mod; Calcium homeostasis modulator

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049249.1 Alternate UU_Cfam_GSD_1.0

    Range
    16012767..16017044 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038578688.1 → XP_038434616.1  calcium homeostasis modulator protein 1

    UniProtKB/TrEMBL
    A0A8C0PNB1, A0A8C0QYN0, A0A8I3Q1Y0
    Conserved Domains (1) summary
    pfam14798
    Location:2 → 254
    Ca_hom_mod; Calcium homeostasis modulator

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006610.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    15993041..15997318 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003639981.5 → XP_003640029.1  calcium homeostasis modulator protein 1

    UniProtKB/TrEMBL
    A0A8C0PNB1, A0A8C0QYN0, A0A8I3Q1Y0
    Conserved Domains (1) summary
    pfam14798
    Location:2 → 254
    Ca_hom_mod; Calcium homeostasis modulator
Nucleotide Protein
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