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LOC100841245 transcription factor NIGT1 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 100841245, updated on 3-Jun-2019

Summary

Gene symbol
LOC100841245
Gene description
transcription factor NIGT1
Locus tag
BRADI_3g10730
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium

Genomic context

See LOC100841245 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 3 NC_016133.3 (8939361..8941666)
102 previous assembly Brachypodium_distachyon_v2.0 (GCF_000005505.2) 3 NC_016133.2 (8926147..8928310)

Chromosome 3 - NC_016133.3Genomic Context describing neighboring genes Neighboring gene coiled-coil domain-containing protein 130 Neighboring gene uncharacterized protein At4g22758 Neighboring gene 26S proteasome regulatory subunit 6B homolog Neighboring gene uncharacterized LOC112271574 Neighboring gene microRNA MIR7751 Neighboring gene uncharacterized LOC100843373

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016133.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    8939361..8941666
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003572675.4XP_003572723.1  transcription factor NIGT1

    UniProtKB/TrEMBL
    I1HZP0
    Conserved Domains (1) summary
    TIGR01557
    Location:230286
    myb_SHAQKYF; myb-like DNA-binding domain, SHAQKYF class
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