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NIP7-2 aquaporin NIP7-2 [ Glycine max (soybean) ]

Gene ID: 100817830, updated on 7-Dec-2023

Summary

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Gene symbol
NIP7-2
Gene description
aquaporin NIP7-2
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
Also known as
GmNIP7;2
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Genomic context

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Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 10 NC_038246.2 (2895103..2897280, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 10 NC_038246.1 (2906076..2908279, complement)

Chromosome 10 - NC_038246.2Genomic Context describing neighboring genes Neighboring gene histone H1 Neighboring gene calmodulin calcium-dependent NAD kinase Neighboring gene uncharacterized LOC121172989 Neighboring gene microRNA MIR166g Neighboring gene flowering locus K homology domain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Investigation of the AQP Family in Soybean and the Promoter Activity of TIP2;6 in Heat Stress and Hormone Responses. Feng ZJ, et al. Int J Mol Sci, 2019 Jan 10. PMID 30634702, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable aquaporin NIP7-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038246.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    2895103..2897280 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026123994.2 → XP_025979779.1  probable aquaporin NIP7-1

    UniProtKB/TrEMBL
    A0A0R0HTX3
    Conserved Domains (1) summary
    cl00200
    Location:5 → 231
    MIP; Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal ...
Nucleotide Protein
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