Format

Send to:

Choose Destination

LOC100796013 squamosa promoter-binding-like protein 12-like [ Glycine max (soybean) ]

Gene ID: 100796013, updated on 1-Jun-2019

Summary

Gene symbol
LOC100796013
Gene description
squamosa promoter-binding-like protein 12-like
Locus tag
GLYMA_11G251500
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Soja

Genomic context

See LOC100796013 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Glycine_max_v2.1 (GCF_000004515.5) 11 NC_038247.1 (34283315..34289337, complement)
102 previous assembly Glycine_max_v2.0 (GCF_000004515.4) 11 NC_016098.2 (34283315..34289339, complement)
101 previous assembly V1.1 (GCF_000004515.3) 11 NC_016098.1 (38244551..38250561)

Chromosome 11 - NC_038247.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100788973 Neighboring gene ranBP2-type zinc finger protein At1g67325 Neighboring gene F-box only protein 6 Neighboring gene nuclear transport factor 2B

Genomic regions, transcripts, and products

General protein information

Preferred Names
uncharacterized protein LOC100796013

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001255388.2NP_001242317.1  uncharacterized protein LOC100796013

    See identical proteins and their annotated locations for NP_001242317.1

    Status: PREDICTED

    Source sequence(s)
    BT093985
    UniProtKB/TrEMBL
    C6T926
    Conserved Domains (1) summary
    pfam03110
    Location:172246
    SBP; SBP domain

RefSeqs of Annotated Genomes: Glycine max Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v2.1 Primary Assembly

Genomic

  1. NC_038247.1 Reference Glycine_max_v2.1 Primary Assembly

    Range
    34283315..34289337 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006590250.3XP_006590313.1  uncharacterized protein LOC100796013 isoform X1

    See identical proteins and their annotated locations for XP_006590313.1

    UniProtKB/TrEMBL
    K7LRZ2
    Conserved Domains (1) summary
    pfam03110
    Location:172246
    SBP; SBP domain
  2. XM_006590252.3XP_006590315.1  uncharacterized protein LOC100796013 isoform X1

    See identical proteins and their annotated locations for XP_006590315.1

    UniProtKB/TrEMBL
    K7LRZ2
    Conserved Domains (1) summary
    pfam03110
    Location:172246
    SBP; SBP domain
  3. XM_006590253.3XP_006590316.1  uncharacterized protein LOC100796013 isoform X1

    See identical proteins and their annotated locations for XP_006590316.1

    UniProtKB/TrEMBL
    K7LRZ2
    Conserved Domains (1) summary
    pfam03110
    Location:172246
    SBP; SBP domain
  4. XM_006590249.2XP_006590312.1  uncharacterized protein LOC100796013 isoform X1

    See identical proteins and their annotated locations for XP_006590312.1

    UniProtKB/TrEMBL
    K7LRZ2
    Conserved Domains (1) summary
    pfam03110
    Location:172246
    SBP; SBP domain
  5. XM_026124282.1XP_025980067.1  uncharacterized protein LOC100796013 isoform X2

    Conserved Domains (1) summary
    pfam03110
    Location:172246
    SBP; SBP domain
Support Center