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NF-YA10 nuclear transcription factor Y subunit A-10 [ Glycine max (soybean) ]

Gene ID: 100794755, updated on 7-Dec-2023

Summary

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Gene symbol
NF-YA10
Gene description
nuclear transcription factor Y subunit A-10
Locus tag
GLYMA_10G082800v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
Also known as
GmNF-YA10
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Genomic context

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Location:
chromosome: 10
Exon count:
7
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 10 NC_038246.2 (9844740..9849784, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 10 NC_038246.1 (10066207..10071276, complement)

Chromosome 10 - NC_038246.2Genomic Context describing neighboring genes Neighboring gene 33 kDa ribonucleoprotein, chloroplastic Neighboring gene uncharacterized LOC112998093 Neighboring gene uncharacterized LOC100795287 Neighboring gene RING-H2 finger protein ATL70

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-wide expression analysis of soybean NF-Y genes reveals potential function in development and drought response. Quach TN, et al. Mol Genet Genomics, 2015 Jun. PMID 25542200, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: nuclear transcription factor Y subunit A-10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038246.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    9844740..9849784 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014763053.3 → XP_014618539.2  LOW QUALITY PROTEIN: nuclear transcription factor Y subunit A-10

    Conserved Domains (1) summary
    smart00521
    Location:159 → 220
    CBF; CCAAT-Binding transcription Factor
Nucleotide Protein
Heading Accession and Version

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