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Bckdha branched chain keto acid dehydrogenase E1 subunit alpha [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100774234, updated on 11-Apr-2024

Summary

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Gene symbol
Bckdha
Gene description
branched chain keto acid dehydrogenase E1 subunit alpha
See related
Ensembl:ENSCGRG00015023478
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Bckdha in Genome Data Viewer
Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615239.1 (217182..227535)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 9 NC_048602.1 (9464031..9491129)

NW_003615239.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 91 Neighboring gene exosome component 5 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 Neighboring gene distal membrane arm assembly component 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in branched-chain amino acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
Names
branched chain keto acid dehydrogenase E1, alpha polypeptide

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615239.1 Reference CriGri_1.0 Primary Assembly

    Range
    217182..227535
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016980340.2 → XP_016835829.2  2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8C2MH58
    Conserved Domains (1) summary
    cd02000
    Location:98 → 390
    TPP_E1_PDC_ADC_BCADC; Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048602.1 Alternate CriGri-PICRH-1.0

    Range
    9464031..9491129
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027430376.2 → XP_027286177.1  2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8C2MH58, A0A9J7GHZ8
    Related
    ENSCGRP00015031145.2, ENSCGRT00015038061.2
Nucleotide Protein Strain
Heading Accession and Version

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