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Elf5 E74 like ETS transcription factor 5 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100774069, updated on 8-Mar-2024
Gene symbol
Elf5
Gene description
E74 like ETS transcription factor 5
Locus tag
I79_003037
See related
Ensembl:ENSCGRG00015010661
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
all
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Try the new Transcripts and proteins table
See Elf5 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613649.1 (1318044..1338370, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (74193944..74214150, complement)

NW_003613649.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and BTB domain containing 2 Neighboring gene catalase Neighboring gene ETS homologous factor Neighboring gene APAF1 interacting protein

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
ETS-related transcription factor Elf-5
Names
E74-like factor 5 (ets domain transcription factor)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613649.1 Reference CriGri_1.0 Primary Assembly

    Range
    1318044..1338370 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035440938.1 → XP_035296829.1  ETS-related transcription factor Elf-5 isoform X2

    UniProtKB/TrEMBL
    A0A9J7H4N4
    Conserved Domains (1) summary
    smart00413
    Location:67 → 151
    ETS; erythroblast transformation specific domain

  2. XM_035440937.1 → XP_035296828.1  ETS-related transcription factor Elf-5 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MET4, G3GYY7
    Conserved Domains (2) summary
    smart00413
    Location:162 → 246
    ETS; erythroblast transformation specific domain
    cl15755
    Location:39 → 122
    SAM_superfamily; SAM (Sterile alpha motif )

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    74193944..74214150 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035446461.1 → XP_035302352.1  ETS-related transcription factor Elf-5 isoform X2

    UniProtKB/TrEMBL
    A0A9J7H4N4
    Conserved Domains (1) summary
    smart00413
    Location:67 → 151
    ETS; erythroblast transformation specific domain

  2. XM_035446460.1 → XP_035302351.1  ETS-related transcription factor Elf-5 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MET4, G3GYY7
    Related
    ENSCGRP00015061283.1, ENSCGRT00015069816.1
    Conserved Domains (2) summary
    smart00413
    Location:162 → 246
    ETS; erythroblast transformation specific domain
    cl15755
    Location:39 → 122
    SAM_superfamily; SAM (Sterile alpha motif )
Nucleotide Protein Strain
Heading Accession and Version

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