Myc MYC proto-oncogene, bHLH transcription factor [Cricetulus griseus (Chinese hamster)] - Gene

Summary

Gene symbol: Myc
Gene description: MYC proto-oncogene, bHLH transcription factor
Gene type: protein coding
RefSeq status: MODEL
Organism: Cricetulus griseus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information: Annotation category: partial on reference assembly
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 10

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
104	current	CriGri_1.0 (GCF_000223135.1)	Unplaced Scaffold	NW_003622136.1 (2402..5309)
104	current	CriGri-PICRH-1.0 (GCF_003668045.3)	10	NC_048603.1 (25947094..25951964, complement)

NW_003622136.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

PMC156147P1 (e-PCR)
- UniSTS:271368

G15987 (e-PCR)
- UniSTS:68875

PMC140827P1 (e-PCR)
- UniSTS:270979

Myc (e-PCR), detects polymorphism
- UniSTS:256954

PMC150726P9 (e-PCR)
- UniSTS:271081

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific	IEA Inferred from Electronic Annotation more info	PubMed
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables protein dimerization activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in positive regulation of cell population proliferation	IEA Inferred from Electronic Annotation more info	PubMed
involved_in regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: myc proto-oncogene protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

NW_003622136.1 Reference CriGri_1.0 Primary Assembly

Range

2402..5309

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_007608000.4 → XP_007606190.2 myc proto-oncogene protein isoform X1

UniProtKB/TrEMBL

A0A8C2MAY4, A0A8C2MDB7

Conserved Domains (2) summary

cd11458
Location:359 → 442

bHLHzip_c-Myc; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in c-Myc and similar proteins

pfam01056
Location:6 → 353

Myc_N; Myc amino-terminal region

Alternate CriGri-PICRH-1.0

Genomic

NC_048603.1 Alternate CriGri-PICRH-1.0

Range

25947094..25951964 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_027431574.2 → XP_027287375.1 myc proto-oncogene protein isoform X2

UniProtKB/TrEMBL

A0A8C2MAY4, A0A8C2MDB7

Conserved Domains (2) summary

cd11458
Location:359 → 442

bHLHzip_c-Myc; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in c-Myc and similar proteins

pfam01056
Location:6 → 353

Myc_N; Myc amino-terminal region
XM_027431573.2 → XP_027287374.1 myc proto-oncogene protein isoform X2

UniProtKB/TrEMBL

A0A8C2MAY4, A0A8C2MDB7

Conserved Domains (2) summary

cd11458
Location:359 → 442

bHLHzip_c-Myc; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in c-Myc and similar proteins

pfam01056
Location:6 → 353

Myc_N; Myc amino-terminal region
XM_027431575.2 → XP_027287376.1 myc proto-oncogene protein isoform X2

UniProtKB/TrEMBL

A0A8C2MAY4, A0A8C2MDB7

Conserved Domains (2) summary

cd11458
Location:359 → 442

bHLHzip_c-Myc; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in c-Myc and similar proteins

pfam01056
Location:6 → 353

Myc_N; Myc amino-terminal region