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Hmg20b high mobility group 20B [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100771597, updated on 5-Sep-2025
Gene symbol
Hmg20b
Gene description
high mobility group 20B
See related
Ensembl:ENSCGRG00015001254
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
all
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Try the new Transcripts and proteins table
See Hmg20b in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614244.1 (519874..524287)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 5 NC_048598.1 (102118528..102123484, complement)

NW_003614244.1Genomic Context describing neighboring genes Neighboring gene tektin bundle interacting protein 1 Neighboring gene major facilitator superfamily domain containing 12 Neighboring gene uncharacterized LOC113836172 Neighboring gene GIPC PDZ domain containing family member 3 Neighboring gene thromboxane A2 receptor

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
XP_035314291.1

Length

  • 356
XP_035314294.1

Length

  • 347

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614244.1 Reference CriGri_1.0 Primary Assembly

    Range
    519874..524287
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035458400.1 → XP_035314291.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X1

    UniProtKB/TrEMBL
    A0A8C2QJK8
    Conserved Domains (2) summary
    COG5648
    Location:79 → 233
    NHP6B; Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics]
    cd01390
    Location:100 → 164
    HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...

  2. XM_035458403.1 → XP_035314294.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X2

    UniProtKB/TrEMBL
    A0A8C2QJK8, A0A9J7JTQ0
    Conserved Domains (1) summary
    cd01390
    Location:100 → 164
    HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048598.1 Alternate CriGri-PICRH-1.0

    Range
    102118528..102123484 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027419241.1 → XP_027275042.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X10

    UniProtKB/TrEMBL
    A0A9J7G562

  2. XM_027419237.1 → XP_027275038.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X6

    UniProtKB/TrEMBL
    A0A9J7G390

  3. XM_027419235.1 → XP_027275036.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X4

    UniProtKB/TrEMBL
    A0A9J7JS34

  4. XM_027419239.1 → XP_027275040.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X8

    UniProtKB/TrEMBL
    A0A9J7G6H3

  5. XM_027419236.1 → XP_027275037.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X5

    UniProtKB/TrEMBL
    A0A9J7G2Y8

  6. XM_027419234.1 → XP_027275035.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X3

    UniProtKB/TrEMBL
    A0A9J7JTD7

  7. XM_027419238.2 → XP_027275039.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X7

    UniProtKB/TrEMBL
    A0A9J7G262

  8. XM_027419240.2 → XP_027275041.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X9

    UniProtKB/TrEMBL
    A0A8C2QJK8, A0A9J7JTQ0
    Related
    ENSCGRP00015044076.1, ENSCGRT00015072512.1
    Conserved Domains (1) summary
    cd01390
    Location:100 → 164
    HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
Nucleotide Protein Strain
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