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Slc38a4 solute carrier family 38 member 4 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100769795, updated on 8-Mar-2024

Summary

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Gene symbol
Slc38a4
Gene description
solute carrier family 38 member 4
Locus tag
I79_018770
See related
Ensembl:ENSCGRG00015003527
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Slc38a4 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614891.1 (328..17068)
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003618854.1 (8718..28428)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (393493840..393561369, complement)

NW_003618854.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113830696

NW_003614891.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103158729 Neighboring gene uncharacterized LOC103160382 Neighboring gene solute carrier family 38 member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amino acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium-coupled neutral amino acid transporter 4
Names
Sodium-coupled neutral amino acid transporter 4
sodium-coupled neutral amino acid transporter 4-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614891.1 Reference CriGri_1.0 Primary Assembly

    Range
    328..17068
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003510476.5 → XP_003510524.3  sodium-coupled neutral amino acid transporter 4 isoform X2

    UniProtKB/TrEMBL
    A0A8C2LBX9
    Conserved Domains (1) summary
    cl00456
    Location:1 → 436
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003618854.1 Reference CriGri_1.0 Primary Assembly

    Range
    8718..28428
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027386240.2 → XP_027242041.1  sodium-coupled neutral amino acid transporter 4 isoform X1

    UniProtKB/TrEMBL
    G3IN05

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    393493840..393561369 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027396393.2 → XP_027252194.1  sodium-coupled neutral amino acid transporter 4 isoform X3

    UniProtKB/TrEMBL
    A0A061IKW1, A0A8C2LBX9
    Conserved Domains (1) summary
    cl00456
    Location:73 → 535
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  2. XM_035440842.1 → XP_035296733.1  sodium-coupled neutral amino acid transporter 4 isoform X3

    UniProtKB/TrEMBL
    A0A061IKW1, A0A8C2LBX9
    Conserved Domains (1) summary
    cl00456
    Location:73 → 535
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  3. XM_035440843.1 → XP_035296734.1  sodium-coupled neutral amino acid transporter 4 isoform X3

    UniProtKB/TrEMBL
    A0A061IKW1, A0A8C2LBX9
    Conserved Domains (1) summary
    cl00456
    Location:73 → 535
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  4. XM_027396392.2 → XP_027252193.1  sodium-coupled neutral amino acid transporter 4 isoform X3

    UniProtKB/TrEMBL
    A0A061IKW1, A0A8C2LBX9
    Related
    ENSCGRP00015004622.1, ENSCGRT00015005713.2
    Conserved Domains (1) summary
    cl00456
    Location:73 → 535
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  5. XM_035440844.1 → XP_035296735.1  sodium-coupled neutral amino acid transporter 4 isoform X3

    UniProtKB/TrEMBL
    A0A061IKW1, A0A8C2LBX9
    Conserved Domains (1) summary
    cl00456
    Location:73 → 535
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
Nucleotide Protein Strain
Heading Accession and Version

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