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Gabarap GABA type A receptor-associated protein [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100767236, updated on 8-Mar-2024
Gene symbol
Gabarap
Gene description
GABA type A receptor-associated protein
See related
Ensembl:ENSCGRG00015008411
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
all
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See Gabarap in Genome Data Viewer
Location:
chromosome: 7
Exon count:
4
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613643.1 (2045422..2048221)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (83839010..83841809)

NW_003613643.1Genomic Context describing neighboring genes Neighboring gene elongator acetyltransferase complex subunit 5 Neighboring gene CTD nuclear envelope phosphatase 1 Neighboring gene PHD finger protein 23 Neighboring gene dishevelled segment polarity protein 2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GABA receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to nitrogen starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macroautophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in autophagosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in autophagosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
gamma-aminobutyric acid receptor-associated protein
Names
GABA(A) receptor-associated protein

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613643.1 Reference CriGri_1.0 Primary Assembly

    Range
    2045422..2048221
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003497193.5 → XP_003497241.1  gamma-aminobutyric acid receptor-associated protein

    See identical proteins and their annotated locations for XP_003497241.1

    UniProtKB/TrEMBL
    A0A3L7GMB9
    Conserved Domains (1) summary
    cd17232
    Location:2 → 116
    Ubl_ATG8_GABARAP; ubiquitin-like (Ubl) domain found in gamma-aminobutyric acid receptor-associated protein (GABARAP)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    83839010..83841809
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027426971.2 → XP_027282772.1  gamma-aminobutyric acid receptor-associated protein

    UniProtKB/TrEMBL
    A0A3L7GMB9
    Related
    ENSCGRP00015010949.2, ENSCGRT00015013428.2
    Conserved Domains (1) summary
    cd17232
    Location:2 → 116
    Ubl_ATG8_GABARAP; ubiquitin-like (Ubl) domain found in gamma-aminobutyric acid receptor-associated protein (GABARAP)
Nucleotide Protein Strain
Heading Accession and Version

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Research Materials