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Pank3 pantothenate kinase 3 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100767141, updated on 8-Mar-2024

Summary

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Gene symbol
Pank3
Gene description
pantothenate kinase 3
See related
Ensembl:ENSCGRG00015021867
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Pank3 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
6
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613626.1 (1093565..1104144)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (50787887..50809893)

NW_003613626.1Genomic Context describing neighboring genes Neighboring gene U2 small nuclear ribonucleoprotein B''-like Neighboring gene slit guidance ligand 3 Neighboring gene microRNA mir-218a Neighboring gene U6 spliceosomal RNA Neighboring gene rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 Neighboring gene arginyl-tRNA synthetase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pantothenate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in coenzyme A biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pantothenate kinase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613626.1 Reference CriGri_1.0 Primary Assembly

    Range
    1093565..1104144
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007651015.2 → XP_007649205.2  pantothenate kinase 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C2N3R2, A0A8C2N682
    Conserved Domains (1) summary
    pfam03630
    Location:14 → 362
    Fumble

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    50787887..50809893
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027425223.2 → XP_027281024.1  pantothenate kinase 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C2N3R2, A0A9J7GD40
    Related
    ENSCGRP00015028895.1, ENSCGRT00015035388.2
    Conserved Domains (1) summary
    pfam03630
    Location:14 → 362
    Fumble
Nucleotide Protein Strain
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