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Ppcdc phosphopantothenoylcysteine decarboxylase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100766343, updated on 8-Mar-2024

Summary

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Gene symbol
Ppcdc
Gene description
phosphopantothenoylcysteine decarboxylase
See related
Ensembl:ENSCGRG00015025044
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Ppcdc in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615059.1 (225140..250087, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (169043089..169067917, complement)

NW_003615059.1Genomic Context describing neighboring genes Neighboring gene GRB2-associated-binding protein 2-like Neighboring gene uncharacterized LOC107978244 Neighboring gene secretory carrier membrane protein 5 Neighboring gene ribonuclease P and MRP subunit p25

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FMN binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphopantothenoylcysteine decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in coenzyme A biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of phosphopantothenoylcysteine decarboxylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphopantothenoylcysteine decarboxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615059.1 Reference CriGri_1.0 Primary Assembly

    Range
    225140..250087 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035461679.1 → XP_035317570.1  phosphopantothenoylcysteine decarboxylase isoform X5

    UniProtKB/TrEMBL
    A0A9J7GYR4
    Conserved Domains (1) summary
    cl19190
    Location:34 → 78
    Flavoprotein

  2. XM_035461676.1 → XP_035317567.1  phosphopantothenoylcysteine decarboxylase isoform X3

    Conserved Domains (1) summary
    cl19190
    Location:8 → 153
    Flavoprotein

  3. XM_016980082.3 → XP_016835571.1  phosphopantothenoylcysteine decarboxylase isoform X1

    UniProtKB/TrEMBL
    G3I830
    Conserved Domains (1) summary
    cl19190
    Location:8 → 192
    Flavoprotein

  4. XM_007651751.4 → XP_007649941.1  phosphopantothenoylcysteine decarboxylase isoform X1

    See identical proteins and their annotated locations for XP_007649941.1

    UniProtKB/TrEMBL
    G3I830
    Conserved Domains (1) summary
    cl19190
    Location:8 → 192
    Flavoprotein

  5. XM_003511221.5 → XP_003511269.1  phosphopantothenoylcysteine decarboxylase isoform X1

    See identical proteins and their annotated locations for XP_003511269.1

    UniProtKB/TrEMBL
    G3I830
    Conserved Domains (1) summary
    cl19190
    Location:8 → 192
    Flavoprotein

  6. XM_016980081.3 → XP_016835570.1  phosphopantothenoylcysteine decarboxylase isoform X1

    UniProtKB/TrEMBL
    G3I830
    Conserved Domains (1) summary
    cl19190
    Location:8 → 192
    Flavoprotein

  7. XM_035461678.1 → XP_035317569.1  phosphopantothenoylcysteine decarboxylase isoform X4

    UniProtKB/TrEMBL
    A0A9J7K850
    Conserved Domains (1) summary
    cl19190
    Location:35 → 120
    Flavoprotein

  8. XM_035461675.1 → XP_035317566.1  phosphopantothenoylcysteine decarboxylase isoform X2

    Conserved Domains (1) summary
    cl19190
    Location:8 → 160
    Flavoprotein

  9. XM_007651750.4 → XP_007649940.1  phosphopantothenoylcysteine decarboxylase isoform X1

    See identical proteins and their annotated locations for XP_007649940.1

    UniProtKB/TrEMBL
    G3I830
    Conserved Domains (1) summary
    cl19190
    Location:8 → 192
    Flavoprotein

  10. XM_035461674.1 → XP_035317565.1  phosphopantothenoylcysteine decarboxylase isoform X1

    UniProtKB/TrEMBL
    G3I830
    Conserved Domains (1) summary
    cl19190
    Location:8 → 192
    Flavoprotein

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    169043089..169067917 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035443732.1 → XP_035299623.1  phosphopantothenoylcysteine decarboxylase isoform X5

    UniProtKB/TrEMBL
    A0A9J7GYR4
    Conserved Domains (1) summary
    cl19190
    Location:34 → 78
    Flavoprotein

  2. XM_035443730.1 → XP_035299621.1  phosphopantothenoylcysteine decarboxylase isoform X3

    UniProtKB/TrEMBL
    A0A9J7GZQ7
    Conserved Domains (1) summary
    cl19190
    Location:8 → 153
    Flavoprotein

  3. XM_027414975.2 → XP_027270776.1  phosphopantothenoylcysteine decarboxylase isoform X1

    UniProtKB/TrEMBL
    A0A9J7GVD8
    Conserved Domains (1) summary
    cl19190
    Location:8 → 192
    Flavoprotein

  4. XM_027414972.2 → XP_027270773.1  phosphopantothenoylcysteine decarboxylase isoform X1

    UniProtKB/TrEMBL
    A0A9J7GVD8
    Conserved Domains (1) summary
    cl19190
    Location:8 → 192
    Flavoprotein

  5. XM_027414974.2 → XP_027270775.1  phosphopantothenoylcysteine decarboxylase isoform X1

    UniProtKB/TrEMBL
    A0A9J7GVD8
    Related
    ENSCGRP00015033226.1, ENSCGRT00015040533.2
    Conserved Domains (1) summary
    cl19190
    Location:8 → 192
    Flavoprotein

  6. XM_027414971.2 → XP_027270772.1  phosphopantothenoylcysteine decarboxylase isoform X1

    UniProtKB/TrEMBL
    A0A9J7GVD8
    Conserved Domains (1) summary
    cl19190
    Location:8 → 192
    Flavoprotein

  7. XM_035443731.1 → XP_035299622.1  phosphopantothenoylcysteine decarboxylase isoform X4

    UniProtKB/TrEMBL
    A0A9J7K850
    Related
    ENSCGRP00015042916.1, ENSCGRT00015080977.1
    Conserved Domains (1) summary
    cl19190
    Location:35 → 120
    Flavoprotein

  8. XM_035443729.1 → XP_035299620.1  phosphopantothenoylcysteine decarboxylase isoform X2

    UniProtKB/TrEMBL
    A0A9J7GUD3
    Related
    ENSCGRP00015046533.1, ENSCGRT00015054714.1
    Conserved Domains (1) summary
    cl19190
    Location:8 → 160
    Flavoprotein

  9. XM_027414973.2 → XP_027270774.1  phosphopantothenoylcysteine decarboxylase isoform X1

    UniProtKB/TrEMBL
    A0A9J7GVD8
    Conserved Domains (1) summary
    cl19190
    Location:8 → 192
    Flavoprotein

  10. XM_035443728.1 → XP_035299619.1  phosphopantothenoylcysteine decarboxylase isoform X1

    UniProtKB/TrEMBL
    A0A9J7GVD8
    Conserved Domains (1) summary
    cl19190
    Location:8 → 192
    Flavoprotein
Nucleotide Protein Strain
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