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Slc4a10 solute carrier family 4 member 10 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100766143, updated on 8-Mar-2024

Summary

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Gene symbol
Slc4a10
Gene description
solute carrier family 4 member 10
Locus tag
I79_016617
See related
Ensembl:ENSCGRG00015008273
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Slc4a10 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
24
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614567.1 (91057..247050)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (112582325..112738330, complement)

NW_003614567.1Genomic Context describing neighboring genes Neighboring gene dipeptidyl peptidase 4 Neighboring gene glucagon

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monoatomic anion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium:bicarbonate symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables solute:inorganic anion antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicarbonate transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of intracellular pH IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium-driven chloride bicarbonate exchanger
Names
Sodium-driven chloride bicarbonate exchanger
solute carrier family 4, sodium bicarbonate cotransporter-like, member 10
solute carrier family 4, sodium bicarbonate transporter, member 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614567.1 Reference CriGri_1.0 Primary Assembly

    Range
    91057..247050
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027440927.2 → XP_027296728.1  sodium-driven chloride bicarbonate exchanger isoform X3

    UniProtKB/TrEMBL
    A0A8C2MJI9

  2. XM_027440928.2 → XP_027296729.1  sodium-driven chloride bicarbonate exchanger isoform X4

    UniProtKB/TrEMBL
    A0A8C2MJI9

  3. XM_007649262.4 → XP_007647452.1  sodium-driven chloride bicarbonate exchanger isoform X1

    UniProtKB/TrEMBL
    A0A8C2MJI9
    Conserved Domains (3) summary
    TIGR00834
    Location:5 → 897
    ae; anion exchange protein
    pfam00955
    Location:312 → 825
    HCO3_cotransp; HCO3- transporter family
    pfam07565
    Location:12 → 271
    Band_3_cyto; Band 3 cytoplasmic domain

  4. XM_035459963.1 → XP_035315854.1  sodium-driven chloride bicarbonate exchanger isoform X2

    UniProtKB/TrEMBL
    A0A8C2MJI9
    Conserved Domains (1) summary
    cl26877
    Location:5 → 896
    Band_3_cyto; Band 3 cytoplasmic domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    112582325..112738330 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035446804.1 → XP_035302695.1  sodium-driven chloride bicarbonate exchanger isoform X4

    UniProtKB/TrEMBL
    A0A8C2MJI9, A0A9J7H0P1
    Conserved Domains (1) summary
    cl26877
    Location:3 → 848
    Band_3_cyto; Band 3 cytoplasmic domain

  2. XM_035446803.1 → XP_035302694.1  sodium-driven chloride bicarbonate exchanger isoform X3

    UniProtKB/TrEMBL
    A0A8C2MJI9, A0A9J7H1I1
    Related
    ENSCGRP00015010909.2, ENSCGRT00015013372.2
    Conserved Domains (1) summary
    cl26877
    Location:3 → 849
    Band_3_cyto; Band 3 cytoplasmic domain

  3. XM_035446802.1 → XP_035302693.1  sodium-driven chloride bicarbonate exchanger isoform X1

    UniProtKB/TrEMBL
    A0A8C2MJI9, A0A9J7K982
    Related
    ENSCGRP00015010847.2, ENSCGRT00015013299.2
    Conserved Domains (1) summary
    cl26877
    Location:5 → 897
    Band_3_cyto; Band 3 cytoplasmic domain
Nucleotide Protein Strain
Heading Accession and Version

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