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Slc9a5 solute carrier family 9 member A5 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100766142, updated on 8-Mar-2024

Summary

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Gene symbol
Slc9a5
Gene description
solute carrier family 9 member A5
Locus tag
I79_016521
See related
Ensembl:ENSCGRG00015007037
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Slc9a5 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614552.1 (283484..301589)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (181637378..181656769)

NW_003614552.1Genomic Context describing neighboring genes Neighboring gene Leucine-rich repeat-containing protein 29 Neighboring gene transmembrane protein 208 Neighboring gene formin homology 2 domain containing 1 Neighboring gene pleckstrin homology and RhoGEF domain containing G4 Neighboring gene potassium channel tetramerization domain containing 19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sodium:proton antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of pH IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium/hydrogen exchanger 5
Names
Sodium/hydrogen exchanger 5
solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614552.1 Reference CriGri_1.0 Primary Assembly

    Range
    283484..301589
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035459910.1 → XP_035315801.1  sodium/hydrogen exchanger 5 isoform X1

    UniProtKB/TrEMBL
    A0A8C2LAA4
    Conserved Domains (1) summary
    TIGR00840
    Location:43 → 632
    b_cpa1; sodium/hydrogen exchanger 3

  2. XM_035459911.1 → XP_035315802.1  sodium/hydrogen exchanger 5 isoform X2

    UniProtKB/TrEMBL
    A0A8C2LAA4
    Conserved Domains (1) summary
    TIGR00840
    Location:43 → 632
    b_cpa1; sodium/hydrogen exchanger 3

  3. XM_035459912.1 → XP_035315803.1  sodium/hydrogen exchanger 5 isoform X3

    UniProtKB/TrEMBL
    A0A8C2LAA4
    Conserved Domains (1) summary
    TIGR00840
    Location:43 → 632
    b_cpa1; sodium/hydrogen exchanger 3

  4. XM_035459913.1 → XP_035315804.1  sodium/hydrogen exchanger 5 isoform X4

    UniProtKB/TrEMBL
    A0A8C2LAA4
    Conserved Domains (1) summary
    TIGR00840
    Location:71 → 531
    b_cpa1; sodium/hydrogen exchanger 3

  5. XM_035459914.1 → XP_035315805.1  sodium/hydrogen exchanger 5 isoform X5

    UniProtKB/TrEMBL
    A0A8C2LAA4
    Conserved Domains (1) summary
    TIGR00840
    Location:71 → 531
    b_cpa1; sodium/hydrogen exchanger 3

  6. XM_035459919.1 → XP_035315810.1  sodium/hydrogen exchanger 5 isoform X9

    Conserved Domains (1) summary
    TIGR00840
    Location:43 → 575
    b_cpa1; sodium/hydrogen exchanger 3

  7. XM_035459915.1 → XP_035315806.1  sodium/hydrogen exchanger 5 isoform X6

    Conserved Domains (1) summary
    TIGR00840
    Location:43 → 632
    b_cpa1; sodium/hydrogen exchanger 3

  8. XM_035459916.1 → XP_035315807.1  sodium/hydrogen exchanger 5 isoform X7

    Conserved Domains (1) summary
    TIGR00840
    Location:43 → 575
    b_cpa1; sodium/hydrogen exchanger 3

  9. XM_035459917.1 → XP_035315808.1  sodium/hydrogen exchanger 5 isoform X7

    Conserved Domains (1) summary
    TIGR00840
    Location:43 → 575
    b_cpa1; sodium/hydrogen exchanger 3

  10. XM_035459918.1 → XP_035315809.1  sodium/hydrogen exchanger 5 isoform X8

    Conserved Domains (1) summary
    TIGR00840
    Location:43 → 575
    b_cpa1; sodium/hydrogen exchanger 3

RNA

  1. XR_004774683.1 RNA Sequence

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    181637378..181656769
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027405809.2 → XP_027261610.1  sodium/hydrogen exchanger 5 isoform X10

    UniProtKB/TrEMBL
    A0A8C2LAA4, A0A9J7FKN3

  2. XM_027405810.2 → XP_027261611.1  sodium/hydrogen exchanger 5 isoform X11

    UniProtKB/TrEMBL
    A0A8C2LAA4, A0A9J7FP81
    Related
    ENSCGRP00015009130.1, ENSCGRT00015011232.2

  3. XM_027405811.2 → XP_027261612.1  sodium/hydrogen exchanger 5 isoform X12

    UniProtKB/TrEMBL
    A0A8C2LAA4, A0A9J7FJH2

  4. XM_035442620.1 → XP_035298511.1  sodium/hydrogen exchanger 5 isoform X13

    UniProtKB/TrEMBL
    A0A8C2LAA4, A0A9J7GTH4
    Conserved Domains (1) summary
    TIGR00840
    Location:71 → 531
    b_cpa1; sodium/hydrogen exchanger 3

  5. XM_035442621.1 → XP_035298512.1  sodium/hydrogen exchanger 5 isoform X14

    UniProtKB/TrEMBL
    A0A8C2LAA4, A0A9J7GSP8
    Conserved Domains (1) summary
    TIGR00840
    Location:71 → 531
    b_cpa1; sodium/hydrogen exchanger 3

  6. XM_027405812.2 → XP_027261613.1  sodium/hydrogen exchanger 5 isoform X15

    UniProtKB/TrEMBL
    A0A9J7JG71, G3HZL4
Nucleotide Protein Strain
Heading Accession and Version

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