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Slc12a7 solute carrier family 12 member 7 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100764745, updated on 8-Mar-2024

Summary

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Gene symbol
Slc12a7
Gene description
solute carrier family 12 member 7
Locus tag
I79_025098
See related
Ensembl:ENSCGRG00015009109
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Slc12a7 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003618301.1 (19972..39595, complement)
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003618765.1 (594..13873, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (368434995..368489794)

NW_003618765.1Genomic Context describing neighboring genes

NW_003618301.1Genomic Context describing neighboring genes Neighboring gene NKD inhibitor of WNT signaling pathway 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables potassium:chloride symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell volume homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in potassium ion import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 12 member 7
Names
solute carrier family 12 (potassium/chloride transporter), member 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003618301.1 Reference CriGri_1.0 Primary Assembly

    Range
    19972..39595 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035438347.1 → XP_035294238.1  solute carrier family 12 member 7 isoform X2

    Conserved Domains (1) summary
    TIGR00930
    Location:45 → 1083
    2a30; K-Cl cotransporter

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003618765.1 Reference CriGri_1.0 Primary Assembly

    Range
    594..13873 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007607767.3 → XP_007605957.2  solute carrier family 12 member 7 isoform X1

    Conserved Domains (1) summary
    TIGR00930
    Location:28 → 1084
    2a30; K-Cl cotransporter

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    368434995..368489794
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027400147.2 → XP_027255948.1  solute carrier family 12 member 7 isoform X3

    UniProtKB/TrEMBL
    A0A8C2M7G0
    Related
    ENSCGRP00015011908.2, ENSCGRT00015014598.2

  2. XM_035440651.1 → XP_035296542.1  solute carrier family 12 member 7 isoform X4

    UniProtKB/TrEMBL
    A0A9J7K5B6
    Related
    ENSCGRP00015011867.2, ENSCGRT00015014538.2
    Conserved Domains (1) summary
    TIGR00930
    Location:1 → 1015
    2a30; K-Cl cotransporter
Nucleotide Protein Strain
Heading Accession and Version

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