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Got1 glutamic-oxaloacetic transaminase 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100762297, updated on 8-Mar-2024

Summary

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Gene symbol
Got1
Gene description
glutamic-oxaloacetic transaminase 1
See related
Ensembl:ENSCGRG00015024117
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Got1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613664.1 (2888804..2910446, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (18045442..18067273)

NW_003613664.1Genomic Context describing neighboring genes Neighboring gene heparanase 2 (inactive) Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 1 Neighboring gene NK2 homeobox 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-aspartate:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aspartate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aspartate aminotransferase, cytoplasmic
Names
Aspartate aminotransferase, cytoplasmic
glutamate oxaloacetate transaminase 1, soluble
glutamic-oxaloacetic transaminase 1, soluble

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613664.1 Reference CriGri_1.0 Primary Assembly

    Range
    2888804..2910446 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003497769.5 → XP_003497817.1  aspartate aminotransferase, cytoplasmic

    See identical proteins and their annotated locations for XP_003497817.1

    UniProtKB/TrEMBL
    G3GZZ0
    Conserved Domains (1) summary
    cl18945
    Location:4 → 413
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    18045442..18067273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027407270.2 → XP_027263071.1  aspartate aminotransferase, cytoplasmic

    UniProtKB/TrEMBL
    G3GZZ0
    Related
    ENSCGRP00015054843.1, ENSCGRT00015071633.1
Nucleotide Protein Strain
Heading Accession and Version

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