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Slc6a15 solute carrier family 6 member 15 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100758864, updated on 11-Apr-2024
Gene symbol
Slc6a15
Gene description
solute carrier family 6 member 15
See related
Ensembl:ENSCGRG00015008540
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
all
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Try the new Transcripts and proteins table
See Slc6a15 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614249.1 (407009..449608, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (168537508..168580167)

NW_003614249.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene leucine rich repeats and IQ motif containing 1 Neighboring gene ALX homeobox 1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proline:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-leucine transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
sodium-dependent neutral amino acid transporter B(0)AT2
Names
Orphan sodium- and chloride-dependent neurotransmitter transporter NTT73
solute carrier family 6 (neurotransmitter transporter), member 15
solute carrier family 6 (neutral amino acid transporter), member 15

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614249.1 Reference CriGri_1.0 Primary Assembly

    Range
    407009..449608 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003506504.5 → XP_003506552.1  sodium-dependent neutral amino acid transporter B(0)AT2

    See identical proteins and their annotated locations for XP_003506552.1

    UniProtKB/TrEMBL
    G3HSR4
    Conserved Domains (1) summary
    cd11522
    Location:61 → 640
    SLC6sbd_SBAT1; Sodium-coupled branched-chain amino-acid transporter 1; solute-binding domain

  2. XM_007647017.4 → XP_007645207.1  sodium-dependent neutral amino acid transporter B(0)AT2

    See identical proteins and their annotated locations for XP_007645207.1

    UniProtKB/TrEMBL
    G3HSR4
    Conserved Domains (1) summary
    cd11522
    Location:61 → 640
    SLC6sbd_SBAT1; Sodium-coupled branched-chain amino-acid transporter 1; solute-binding domain

  3. XM_007647015.4 → XP_007645205.1  sodium-dependent neutral amino acid transporter B(0)AT2

    See identical proteins and their annotated locations for XP_007645205.1

    UniProtKB/TrEMBL
    G3HSR4
    Conserved Domains (1) summary
    cd11522
    Location:61 → 640
    SLC6sbd_SBAT1; Sodium-coupled branched-chain amino-acid transporter 1; solute-binding domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    168537508..168580167
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027394155.2 → XP_027249956.1  sodium-dependent neutral amino acid transporter B(0)AT2

    UniProtKB/TrEMBL
    G3HSR4

  2. XM_027394158.2 → XP_027249959.1  sodium-dependent neutral amino acid transporter B(0)AT2

    UniProtKB/TrEMBL
    G3HSR4

  3. XM_027394157.2 → XP_027249958.1  sodium-dependent neutral amino acid transporter B(0)AT2

    UniProtKB/TrEMBL
    G3HSR4
    Related
    ENSCGRP00015011099.1, ENSCGRT00015013615.2
Nucleotide Protein Strain
Heading Accession and Version

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