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Atg2a autophagy related 2A [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100758391, updated on 5-Sep-2025
Gene symbol
Atg2a
Gene description
autophagy related 2A
Locus tag
I79_019091
See related
Ensembl:ENSCGRG00015013727
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See Atg2a in Genome Data Viewer
Location:
chromosome: 3
Exon count:
39
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614946.1 (292553..313545, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (53095445..53116440, complement)

NW_003614946.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-194-2 Neighboring gene microRNA mir-192 Neighboring gene protein phosphatase 2 regulatory subunit B'beta Neighboring gene glycoprotein hormone subunit alpha 2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in piecemeal microautophagy of the nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reticulophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extrinsic component of membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
autophagy-related protein 2 homolog A
Names
ATG2 autophagy related 2 homolog A
Autophagy-related protein 2-like A
XP_027298149.2

Length

  • 1917
XP_027298150.2

Length

  • 1916
XP_027298151.2

Length

  • 1915

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614946.1 Reference CriGri_1.0 Primary Assembly

    Range
    292553..313545 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027442350.2 → XP_027298151.2  autophagy-related protein 2 homolog A isoform X3

    UniProtKB/TrEMBL
    A0A8C2LI21
    Conserved Domains (3) summary
    COG5043
    Location:43 → 244
    MRS6; Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]
    pfam09333
    Location:1816 → 1909
    ATG_C; Autophagy-related protein C terminal domain
    pfam12624
    Location:43 → 109
    Chorein_N; N-terminal region of Chorein or VPS13

  2. XM_027442349.2 → XP_027298150.2  autophagy-related protein 2 homolog A isoform X2

    UniProtKB/TrEMBL
    A0A8C2LI21
    Conserved Domains (3) summary
    COG5043
    Location:43 → 244
    MRS6; Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]
    pfam09333
    Location:1817 → 1910
    ATG_C; Autophagy-related protein C terminal domain
    pfam12624
    Location:43 → 109
    Chorein_N; N-terminal region of Chorein or VPS13

  3. XM_027442348.2 → XP_027298149.2  autophagy-related protein 2 homolog A isoform X1

    UniProtKB/TrEMBL
    A0A8C2LI21
    Conserved Domains (3) summary
    COG5043
    Location:43 → 244
    MRS6; Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]
    pfam09333
    Location:1818 → 1911
    ATG_C; Autophagy-related protein C terminal domain
    pfam12624
    Location:43 → 109
    Chorein_N; N-terminal region of Chorein or VPS13

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    53095445..53116440 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027408510.2 → XP_027264311.1  autophagy-related protein 2 homolog A isoform X7

    UniProtKB/TrEMBL
    A0A8C2LI21, A0A9J7FSC9

  2. XM_027408509.2 → XP_027264310.1  autophagy-related protein 2 homolog A isoform X6

    UniProtKB/TrEMBL
    A0A8C2LI21, A0A9J7FMU2
    Related
    ENSCGRP00015018010.2, ENSCGRT00015022121.2

  3. XM_027408508.2 → XP_027264309.1  autophagy-related protein 2 homolog A isoform X5

    UniProtKB/TrEMBL
    A0A8C2LI21, A0A9J7FQW3

  4. XM_027408507.2 → XP_027264308.1  autophagy-related protein 2 homolog A isoform X4

    UniProtKB/TrEMBL
    A0A8C2LI21, A0A9J7FNC8
Nucleotide Protein Strain
Heading Accession and Version

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