Format

Send to:

Choose Destination

Atg2a autophagy related 2A [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100758391, updated on 28-May-2021

Summary

Gene symbol
Atg2a
Gene description
autophagy related 2A
Locus tag
I79_019091
See related
Ensembl:ENSCGRG00015013727
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Atg2a in Genome Data Viewer
Location:
chromosome: 3
Exon count:
39
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614946.1 (292553..313545, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (53095445..53116440, complement)

NW_003614946.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-194-2 Neighboring gene microRNA mir-192 Neighboring gene protein phosphatase 2 regulatory subunit B'beta Neighboring gene glycoprotein hormone subunit alpha 2

Genomic regions, transcripts, and products

General protein information

Preferred Names
autophagy-related protein 2 homolog A
Names
ATG2 autophagy related 2 homolog A
Autophagy-related protein 2-like A

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614946.1 Reference CriGri_1.0 Primary Assembly

    Range
    292553..313545 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027442350.2XP_027298151.2  autophagy-related protein 2 homolog A isoform X3

    Conserved Domains (3) summary
    COG5043
    Location:43244
    MRS6; Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]
    pfam09333
    Location:18161909
    ATG_C; Autophagy-related protein C terminal domain
    pfam12624
    Location:43109
    Chorein_N; N-terminal region of Chorein or VPS13
  2. XM_027442349.2XP_027298150.2  autophagy-related protein 2 homolog A isoform X2

    Conserved Domains (3) summary
    COG5043
    Location:43244
    MRS6; Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]
    pfam09333
    Location:18171910
    ATG_C; Autophagy-related protein C terminal domain
    pfam12624
    Location:43109
    Chorein_N; N-terminal region of Chorein or VPS13
  3. XM_027442348.2XP_027298149.2  autophagy-related protein 2 homolog A isoform X1

    Conserved Domains (3) summary
    COG5043
    Location:43244
    MRS6; Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]
    pfam09333
    Location:18181911
    ATG_C; Autophagy-related protein C terminal domain
    pfam12624
    Location:43109
    Chorein_N; N-terminal region of Chorein or VPS13

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    53095445..53116440 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027408510.2XP_027264311.1  autophagy-related protein 2 homolog A isoform X7

  2. XM_027408509.2XP_027264310.1  autophagy-related protein 2 homolog A isoform X6

    Related
    ENSCGRP00015017947.1
  3. XM_027408508.2XP_027264309.1  autophagy-related protein 2 homolog A isoform X5

  4. XM_027408507.2XP_027264308.1  autophagy-related protein 2 homolog A isoform X4

Support Center