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Runx1 RUNX family transcription factor 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100758283, updated on 5-Sep-2025
Gene symbol
Runx1
Gene description
RUNX family transcription factor 1
Locus tag
I79_012456
See related
Ensembl:ENSCGRG00015014554
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
all
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Try the new Transcripts and proteins table
See Runx1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614135.1 (228170..446599, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (4958369..5180218)

NW_003614135.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118238757 Neighboring gene chloride intracellular channel 6 Neighboring gene uncharacterized LOC103161536 Neighboring gene uncharacterized LOC107980209 Neighboring gene uncharacterized LOC103161537 Neighboring gene uncharacterized LOC103161538

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hemopoiesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
runt-related transcription factor 1
Names
runt related transcription factor 1
XP_035313564.1

Length

  • 464
XP_035313565.1

Length

  • 450
XP_035313566.1

Length

  • 401
XP_035313567.1

Length

  • 387

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614135.1 Reference CriGri_1.0 Primary Assembly

    Range
    228170..446599 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035457675.1 → XP_035313566.1  runt-related transcription factor 1 isoform X3

    UniProtKB/TrEMBL
    A0A9J7FXL7
    Conserved Domains (2) summary
    pfam00853
    Location:68 → 194
    Runt; Runt domain
    pfam08504
    Location:311 → 401
    RunxI; Runx inhibition domain

  2. XM_035457673.1 → XP_035313564.1  runt-related transcription factor 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MQ08
    Conserved Domains (2) summary
    pfam00853
    Location:68 → 194
    Runt; Runt domain
    pfam08504
    Location:374 → 464
    RunxI; Runx inhibition domain

  3. XM_035457676.1 → XP_035313567.1  runt-related transcription factor 1 isoform X4

    UniProtKB/TrEMBL
    A0A8C2MKL6
    Conserved Domains (2) summary
    pfam00853
    Location:54 → 180
    Runt; Runt domain
    pfam08504
    Location:297 → 387
    RunxI; Runx inhibition domain

  4. XM_035457674.1 → XP_035313565.1  runt-related transcription factor 1 isoform X2

    Conserved Domains (2) summary
    pfam00853
    Location:54 → 180
    Runt; Runt domain
    pfam08504
    Location:360 → 450
    RunxI; Runx inhibition domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    4958369..5180218
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027415623.2 → XP_027271424.1  runt-related transcription factor 1 isoform X6

    UniProtKB/TrEMBL
    A0A9J7FXL7
    Related
    ENSCGRP00015018988.2, ENSCGRT00015023393.2
    Conserved Domains (2) summary
    pfam00853
    Location:68 → 194
    Runt; Runt domain
    pfam08504
    Location:311 → 401
    RunxI; Runx inhibition domain

  2. XM_027415622.2 → XP_027271423.1  runt-related transcription factor 1 isoform X5

    UniProtKB/TrEMBL
    A0A8C2MQ08
    Related
    ENSCGRP00015018977.1, ENSCGRT00015023380.2
    Conserved Domains (2) summary
    pfam00853
    Location:68 → 194
    Runt; Runt domain
    pfam08504
    Location:374 → 464
    RunxI; Runx inhibition domain

  3. XM_027415624.2 → XP_027271425.1  runt-related transcription factor 1 isoform X8

    UniProtKB/TrEMBL
    A0A9J7G1P3

  4. XM_035444306.1 → XP_035300197.1  runt-related transcription factor 1 isoform X7

    UniProtKB/TrEMBL
    A0A8C2MKL6
    Conserved Domains (2) summary
    pfam00853
    Location:54 → 180
    Runt; Runt domain
    pfam08504
    Location:297 → 387
    RunxI; Runx inhibition domain
Nucleotide Protein Strain
Heading Accession and Version

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