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Scp2 sterol carrier protein 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100757558, updated on 22-Oct-2023

Summary

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Gene symbol
Scp2
Gene description
sterol carrier protein 2
See related
Ensembl:ENSCGRG00015006676
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Scp2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613624.1 (3768997..3844680)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (41714554..41790094)

NW_003613624.1Genomic Context describing neighboring genes Neighboring gene enoyl-CoA hydratase domain containing 2 Neighboring gene 60S ribosomal protein L34-like Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
non-specific lipid-transfer protein
Names
Non-specific lipid-transfer protein
sterol carrier protein 2, liver

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613624.1 Reference CriGri_1.0 Primary Assembly

    Range
    3768997..3844680
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003496511.5 → XP_003496559.1  non-specific lipid-transfer protein

    See identical proteins and their annotated locations for XP_003496559.1

    UniProtKB/TrEMBL
    G3GW11
    Conserved Domains (3) summary
    PRK08256
    Location:12 → 404
    PRK08256; lipid-transfer protein; Provisional
    cd00826
    Location:17 → 403
    nondecarbox_cond_enzymes; nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 ...
    pfam02036
    Location:452 → 538
    SCP2; SCP-2 sterol transfer family

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    41714554..41790094
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027402413.2 → XP_027258214.1  non-specific lipid-transfer protein

    UniProtKB/TrEMBL
    G3GW11
    Related
    ENSCGRP00015058524.1, ENSCGRT00015051737.1
Nucleotide Protein Strain
Heading Accession and Version

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