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Cic capicua transcriptional repressor [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100756465, updated on 5-Sep-2025
Gene symbol
Cic
Gene description
capicua transcriptional repressor
Locus tag
I79_016911
See related
Ensembl:ENSCGRG00015021270
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See Cic in Genome Data Viewer
Location:
chromosome: 9
Exon count:
20
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614601.1 (211732..236932, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 9 NC_048602.1 (10016365..10043691)

NW_003614601.1Genomic Context describing neighboring genes Neighboring gene proline rich 19 Neighboring gene platelet activating factor acetylhydrolase 1b catalytic subunit 3 Neighboring gene ETS repressor factor like Neighboring gene glycogen synthase kinase 3 alpha

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
protein capicua homolog
Names
Protein capicua-like
XP_035316003.1

Length

  • 1643

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614601.1 Reference CriGri_1.0 Primary Assembly

    Range
    211732..236932 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035460112.1 → XP_035316003.1  protein capicua homolog isoform X1

    Conserved Domains (3) summary
    COG5648
    Location:708 → 873
    NHP6B; Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics]
    cd01388
    Location:757 → 828
    SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
    pfam16090
    Location:251 → 348
    DUF4819; Domain of unknown function (DUF4819)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048602.1 Alternate CriGri-PICRH-1.0

    Range
    10016365..10043691
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035449205.1 → XP_035305096.1  protein capicua homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C2MH40, A0A9J7KBA2
    Related
    ENSCGRP00015028336.1, ENSCGRT00015034702.2
    Conserved Domains (4) summary
    PHA03247
    Location:1642 → 2185
    PHA03247; large tegument protein UL36; Provisional
    COG5648
    Location:1076 → 1220
    NHP6B; Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics]
    cd01388
    Location:1104 → 1175
    SOX-TCF_HMG-box; class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and ...
    pfam16090
    Location:251 → 348
    DUF4819; Domain of unknown function (DUF4819)
Nucleotide Protein Strain
Heading Accession and Version

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