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Slc27a2 solute carrier family 27 member 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100754190, updated on 11-Apr-2024

Summary

Gene symbol
Slc27a2
Gene description
solute carrier family 27 member 2
Locus tag
I79_003501
See related
Ensembl:ENSCGRG00015016380
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
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Genomic context

See Slc27a2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613665.1 (2719617..2758065, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (51943290..51982095, complement)

NW_003613665.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene GA binding protein transcription factor subunit beta 1 Neighboring gene histidine decarboxylase Neighboring gene ATPase phospholipid transporting 8B4 (putative)

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in bile acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in long-chain fatty acid import into cell IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in very long-chain fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
very long-chain acyl-CoA synthetase
Names
Very long-chain acyl-CoA synthetase
solute carrier family 27 (fatty acid transporter), member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613665.1 Reference CriGri_1.0 Primary Assembly

    Range
    2719617..2758065 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003497818.4XP_003497866.1  very long-chain acyl-CoA synthetase isoform X1

    UniProtKB/TrEMBL
    G3H053
    Conserved Domains (2) summary
    cd05938
    Location:17551
    hsFATP2a_ACSVL_like; Fatty acid transport proteins (FATP) including hsFATP2, hsFATP5, and hsFATP6, and similar proteins
    PRK08279
    Location:2554
    PRK08279; long-chain-acyl-CoA synthetase; Validated

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    51943290..51982095 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035445995.1XP_035301886.1  very long-chain acyl-CoA synthetase isoform X3

    UniProtKB/TrEMBL
    A0A9J7JZ59, G3H053
    Conserved Domains (1) summary
    cl17068
    Location:74557
    AFD_class_I; Adenylate forming domain, Class I superfamily
  2. XM_027421929.2XP_027277730.1  very long-chain acyl-CoA synthetase isoform X2

    UniProtKB/TrEMBL
    A0A8C2QMW3
    Related
    ENSCGRP00015021504.1, ENSCGRT00015026412.2