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Galc galactosylceramidase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100751905, updated on 22-Oct-2023

Summary

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Gene symbol
Galc
Gene description
galactosylceramidase
Locus tag
I79_001290
See related
Ensembl:ENSCGRG00015018565
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Galc in Genome Data Viewer
Location:
chromosome: 5
Exon count:
16
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613607.1 (367018..403438)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 5 NC_048598.1 (107388555..107430762)

NW_003613607.1Genomic Context describing neighboring genes Neighboring gene potassium two pore domain channel subfamily K member 10 Neighboring gene G protein-coupled receptor 65 Neighboring gene small nucleolar RNA SNORA48 Neighboring gene uncharacterized LOC118238893

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactosylceramide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactocerebrosidase
Names
Galactocerebrosidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613607.1 Reference CriGri_1.0 Primary Assembly

    Range
    367018..403438
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035457865.1 → XP_035313756.1  galactocerebrosidase isoform X1

    UniProtKB/TrEMBL
    A0A8C2M232
    Conserved Domains (2) summary
    pfam02057
    Location:55 → 349
    Glyco_hydro_59; Glycosyl hydrolase family 59
    pfam17387
    Location:357 → 463
    Glyco_hydro_59M; Glycosyl hydrolase family 59 central domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048598.1 Alternate CriGri-PICRH-1.0

    Range
    107388555..107430762
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027419589.2 → XP_027275390.1  galactocerebrosidase isoform X2

    UniProtKB/TrEMBL
    A0A8C2M232
    Related
    ENSCGRP00015024407.1, ENSCGRT00015029949.2
    Conserved Domains (2) summary
    pfam02057
    Location:55 → 349
    Glyco_hydro_59; Glycosyl hydrolase family 59
    pfam17387
    Location:357 → 463
    Glyco_hydro_59M; Glycosyl hydrolase family 59 central domain

  2. XM_027419591.2 → XP_027275392.1  galactocerebrosidase isoform X3

    UniProtKB/TrEMBL
    A0A9J7G5P4
Nucleotide Protein Strain
Heading Accession and Version

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