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Tgm6 transglutaminase 6 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100751827, updated on 8-Apr-2017
Gene symbol
Tgm6
Gene description
transglutaminase 6
Locus tag
I79_005054
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613715.1 (2418560..2442678, complement)

NW_003613715.1Genomic Context describing neighboring genes Neighboring gene TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L pseudogene Neighboring gene transmembrane channel like 2 Neighboring gene small nuclear ribonucleoprotein polypeptides B and B1 Neighboring gene non-histone chromosomal protein HMG-14 pseudogene Neighboring gene transglutaminase 3

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Preferred Names
LOW QUALITY PROTEIN: protein-glutamine gamma-glutamyltransferase 6; protein-glutamine gamma-glutamyltransferase 6
Names
Protein-glutamine gamma-glutamyltransferase 6

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613715.1 Reference CriGri_1.0 Primary Assembly

    Range
    2418560..2442678 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007637407.1XP_007635597.1  LOW QUALITY PROTEIN: protein-glutamine gamma-glutamyltransferase 6 isoform X1

    Conserved Domains (4) summary
    smart00460
    Location:295386
    TGc; Transglutaminase/protease-like homologues
    COG1305
    Location:297394
    YebA; Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]
    pfam00868
    Location:32144
    Transglut_N; Transglutaminase family
    pfam00927
    Location:523628
    Transglut_C; Transglutaminase family, C-terminal ig like domain

Alternate C_griseus_v1.0

Genomic

  1. NW_006885683.1 Alternate C_griseus_v1.0

    Range
    581242..608859
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007637938.1XP_007636128.1  protein-glutamine gamma-glutamyltransferase 6 isoform X2

    Conserved Domains (4) summary
    smart00460
    Location:323414
    TGc; Transglutaminase/protease-like homologues
    COG1305
    Location:325422
    YebA; Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]
    pfam00868
    Location:60172
    Transglut_N; Transglutaminase family
    pfam00927
    Location:551656
    Transglut_C; Transglutaminase family, C-terminal ig like domain
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