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LOC100751631 high mobility group protein B1-like [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100751631, updated on 19-Dec-2023
Gene symbol
LOC100751631
Gene description
high mobility group protein B1-like
See related
Ensembl:ENSCGRG00015012596
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
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See LOC100751631 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613658.1 (1966497..1967201, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 5 NC_048598.1 (31503166..31503857, complement)

NW_003613658.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L37a-like Neighboring gene RAB GTPase activating protein 1 like Neighboring gene G protein-coupled receptor 52 Neighboring gene U1 spliceosomal RNA Neighboring gene small nucleolar RNA SNORA1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding, bending IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
high mobility group protein B1-like

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613658.1 Reference CriGri_1.0 Primary Assembly

    Range
    1966497..1967201 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035442352.1 → XP_035298243.1  high mobility group protein B1-like

    UniProtKB/TrEMBL
    A0A8C2QCK5, G3GWG3
    Conserved Domains (2) summary
    pfam00505
    Location:95 → 162
    HMG_box; HMG (high mobility group) box
    pfam09011
    Location:6 → 78
    HMG_box_2; HMG-box domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048598.1 Alternate CriGri-PICRH-1.0

    Range
    31503166..31503857 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035445769.1 → XP_035301660.1  high mobility group protein B1-like

    UniProtKB/TrEMBL
    A0A8C2QCK5, G3GWG3
    Related
    ENSCGRT00015013588.2
    Conserved Domains (2) summary
    pfam00505
    Location:95 → 162
    HMG_box; HMG (high mobility group) box
    pfam09011
    Location:6 → 78
    HMG_box_2; HMG-box domain
Nucleotide Protein Strain
Heading Accession and Version

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