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Uvrag UV radiation resistance associated [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100751375, updated on 8-Mar-2024
Gene symbol
Uvrag
Gene description
UV radiation resistance associated
See related
Ensembl:ENSCGRG00015013375
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
all
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See Uvrag in Genome Data Viewer
Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614327.1 (557161..808308, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (100412918..100666235)

NW_003614327.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103161237 Neighboring gene Wnt family member 11 Neighboring gene non-histone chromosomal protein HMG-14-like Neighboring gene diacylglycerol O-acyltransferase 2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SNARE complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lytic vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
UV radiation resistance-associated gene protein

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614327.1 Reference CriGri_1.0 Primary Assembly

    Range
    557161..808308 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007647657.4 → XP_007645847.1  UV radiation resistance-associated gene protein isoform X2

    See identical proteins and their annotated locations for XP_007645847.1

    UniProtKB/TrEMBL
    G3HUS1
    Conserved Domains (1) summary
    pfam10186
    Location:82 → 340
    Atg14; Vacuolar sorting 38 and autophagy-related subunit 14

  2. XM_007647656.2 → XP_007645846.1  UV radiation resistance-associated gene protein isoform X1

    UniProtKB/TrEMBL
    A0A9J7FMA3
    Conserved Domains (2) summary
    cd00030
    Location:51 → 125
    C2; C2 domain
    pfam10186
    Location:206 → 401
    Atg14; Vacuolar sorting 38 and autophagy-related subunit 14

  3. XM_007647658.4 → XP_007645848.1  UV radiation resistance-associated gene protein isoform X2

    See identical proteins and their annotated locations for XP_007645848.1

    UniProtKB/TrEMBL
    G3HUS1
    Conserved Domains (1) summary
    pfam10186
    Location:82 → 340
    Atg14; Vacuolar sorting 38 and autophagy-related subunit 14

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    100412918..100666235
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027407741.2 → XP_027263542.1  UV radiation resistance-associated gene protein isoform X3

    UniProtKB/TrEMBL
    A0A8C2LIV8
    Related
    ENSCGRP00015017428.2, ENSCGRT00015021411.2

  2. XM_035442366.1 → XP_035298257.1  UV radiation resistance-associated gene protein isoform X2

    UniProtKB/TrEMBL
    G3HUS1
    Conserved Domains (1) summary
    pfam10186
    Location:82 → 340
    Atg14; Vacuolar sorting 38 and autophagy-related subunit 14

  3. XM_027407740.1 → XP_027263541.1  UV radiation resistance-associated gene protein isoform X1

    UniProtKB/TrEMBL
    A0A9J7FMA3
    Related
    ENSCGRP00015017411.2, ENSCGRT00015021393.2

  4. XM_027407742.1 → XP_027263543.1  UV radiation resistance-associated gene protein isoform X2

    UniProtKB/TrEMBL
    G3HUS1
    Conserved Domains (1) summary
    pfam10186
    Location:82 → 340
    Atg14; Vacuolar sorting 38 and autophagy-related subunit 14
Nucleotide Protein Strain
Heading Accession and Version

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