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Dera deoxyribose-phosphate aldolase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100750675, updated on 8-Mar-2024

Summary

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Gene symbol
Dera
Gene description
deoxyribose-phosphate aldolase
Locus tag
I79_007226
See related
Ensembl:ENSCGRG00015001438
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613820.1 (1439709..1529471, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 8 NC_048601.1 (11184984..11278518, complement)

NW_003613820.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118239266 Neighboring gene uncharacterized LOC103163375 Neighboring gene solute carrier family 15 member 5 Neighboring gene SNRPN upstream reading frame protein-like Neighboring gene serine/threonine kinase receptor associated protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribose-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribose-phosphate aldolase
Names
Putative deoxyribose-phosphate aldolase
deoxyribose-phosphate aldolase (putative)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613820.1 Reference CriGri_1.0 Primary Assembly

    Range
    1439709..1529471 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035454885.1 → XP_035310776.1  deoxyribose-phosphate aldolase

    UniProtKB/TrEMBL
    A0A061HWY5
    Conserved Domains (1) summary
    cd00959
    Location:50 → 277
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  2. XM_035454886.1 → XP_035310777.1  deoxyribose-phosphate aldolase

    UniProtKB/TrEMBL
    A0A061HWY5
    Conserved Domains (1) summary
    cd00959
    Location:50 → 277
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  3. XM_003500910.5 → XP_003500958.1  deoxyribose-phosphate aldolase

    UniProtKB/TrEMBL
    A0A061HWY5
    Conserved Domains (1) summary
    cd00959
    Location:50 → 277
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  4. XM_035454884.1 → XP_035310775.1  deoxyribose-phosphate aldolase

    UniProtKB/TrEMBL
    A0A061HWY5
    Conserved Domains (1) summary
    cd00959
    Location:50 → 277
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048601.1 Alternate CriGri-PICRH-1.0

    Range
    11184984..11278518 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035448690.1 → XP_035304581.1  deoxyribose-phosphate aldolase

    UniProtKB/TrEMBL
    A0A061HWY5, A0A8C2MX69
    Conserved Domains (1) summary
    cd00959
    Location:50 → 277
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  2. XM_035448691.1 → XP_035304582.1  deoxyribose-phosphate aldolase

    UniProtKB/TrEMBL
    A0A061HWY5, A0A8C2MX69
    Related
    ENSCGRP00015001793.2, ENSCGRT00015002250.2
    Conserved Domains (1) summary
    cd00959
    Location:50 → 277
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  3. XM_027429931.2 → XP_027285732.1  deoxyribose-phosphate aldolase

    UniProtKB/TrEMBL
    A0A061HWY5, A0A8C2MX69
    Related
    ENSCGRP00015001741.2, ENSCGRT00015002192.2
    Conserved Domains (1) summary
    cd00959
    Location:50 → 277
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  4. XM_035448688.1 → XP_035304579.1  deoxyribose-phosphate aldolase

    UniProtKB/TrEMBL
    A0A061HWY5, A0A8C2MX69
    Conserved Domains (1) summary
    cd00959
    Location:50 → 277
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family
Nucleotide Protein Strain
Heading Accession and Version

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