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Got1l1 glutamic-oxaloacetic transaminase 1 like 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100750547, updated on 8-Mar-2024

Summary

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Gene symbol
Got1l1
Gene description
glutamic-oxaloacetic transaminase 1 like 1
See related
Ensembl:ENSCGRG00015025521
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Got1l1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613685.1 (463311..469296)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (56629489..56635473)

NW_003613685.1Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4E binding protein 1 Neighboring gene adrenoceptor beta 3 Neighboring gene U6 spliceosomal RNA Neighboring gene RAB11 family interacting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-aspartate:2-oxoglutarate aminotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aspartate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative aspartate aminotransferase, cytoplasmic 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613685.1 Reference CriGri_1.0 Primary Assembly

    Range
    463311..469296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003498234.3 → XP_003498282.1  putative aspartate aminotransferase, cytoplasmic 2

    See identical proteins and their annotated locations for XP_003498282.1

    UniProtKB/TrEMBL
    A0A8C2LNF2, A0A9J7F4Y9
    Conserved Domains (2) summary
    pfam00155
    Location:49 → 395
    Aminotran_1_2; Aminotransferase class I and II
    cl18945
    Location:5 → 400
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276807.1 Alternate CriGri-PICRH-1.0

    Range
    56629489..56635473
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027395399.2 → XP_027251200.1  putative aspartate aminotransferase, cytoplasmic 2

    UniProtKB/TrEMBL
    A0A8C2LNF2, A0A9J7F4Y9
    Related
    ENSCGRP00015033855.1, ENSCGRT00015041300.2
Nucleotide Protein Strain
Heading Accession and Version

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