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LOC100747798 non-histone chromosomal protein 6 [ Bombus impatiens (common eastern bumble bee) ]

Gene ID: 100747798, updated on 1-Oct-2024
Gene symbol
LOC100747798
Gene description
non-histone chromosomal protein 6
See related
EnsemblRapid:ENSBIMG00000014348
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus impatiens
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Pyrobombus
Orthologs
all
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Try the new Transcripts and proteins table
See LOC100747798 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
103 current BIMP_2.2 (GCF_000188095.3) Unplaced Scaffold NT_176533.1 (640120..643443, complement)

NT_176533.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100745603 Neighboring gene alkylated DNA repair protein alkB homolog 8 Neighboring gene exosome complex component Rrp45 Neighboring gene SIN3-associated polypeptide 30

Genomic Sequence:
NT_176533 Unplaced Scaffold Reference BIMP_2.2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Genes involved in convergent evolution of eusociality in bees. Woodard SH, et al. Proc Natl Acad Sci U S A, 2011 May 3. PMID 21482769, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding, bending IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
non-histone chromosomal protein 6; putative high mobility group protein B1-like 1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Bombus impatiens Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BIMP_2.2

Genomic

  1. NT_176533.1 Reference BIMP_2.2

    Range
    640120..643443 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024364888.2 → XP_024220656.1  non-histone chromosomal protein 6 isoform X2

    UniProtKB/TrEMBL
    A0A6P6F6H5
    Conserved Domains (1) summary
    COG5648
    Location:85 → 174
    NHP6B; Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics]

  2. XM_024364886.2 → XP_024220654.1  non-histone chromosomal protein 6 isoform X2

    UniProtKB/TrEMBL
    A0A6P6F6H5
    Related
    ENSBIMP00000021129.1, ENSBIMT00000033706.1
    Conserved Domains (1) summary
    COG5648
    Location:85 → 174
    NHP6B; Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics]

  3. XM_033318774.1 → XP_033174665.1  putative high mobility group protein B1-like 1 isoform X1

    UniProtKB/TrEMBL
    A0A6P8KVS1
    Related
    ENSBIMP00000021134.1, ENSBIMT00000033705.1
    Conserved Domains (1) summary
    COG5648
    Location:107 → 196
    NHP6B; Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics]

  4. XM_024364889.2 → XP_024220657.1  non-histone chromosomal protein 6 isoform X2

    UniProtKB/TrEMBL
    A0A6P6F6H5
    Conserved Domains (1) summary
    COG5648
    Location:85 → 174
    NHP6B; Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics]
Nucleotide Protein
Heading Accession and Version

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