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Aup1 AUP1 lipid droplet regulating VLDL assembly factor [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100734345, updated on 3-Dec-2024
Gene symbol
Aup1
Gene description
AUP1 lipid droplet regulating VLDL assembly factor
See related
Ensembl:ENSCPOG00000025054
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
all
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See Aup1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947501.1 (28226852..28229889, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176382.1 (14701552..14704543)

NW_026947501.1Genomic Context describing neighboring genes Neighboring gene T cell leukemia homeobox 2 Neighboring gene DEAQ-box RNA dependent ATPase 1 Neighboring gene HtrA serine peptidase 2 Neighboring gene lysyl oxidase like 3 Neighboring gene docking protein 1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
lipid droplet-regulating VLDL assembly factor AUP1
Names
ancient ubiquitous protein 1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947501.1 Reference mCavPor4.1

    Range
    28226852..28229889 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003468970.5 → XP_003469018.4  lipid droplet-regulating VLDL assembly factor AUP1 isoform X1

    UniProtKB/TrEMBL
    H0W5Z0

  2. XM_063229632.1 → XP_063085702.1  lipid droplet-regulating VLDL assembly factor AUP1 isoform X4

  3. XM_063229631.1 → XP_063085701.1  lipid droplet-regulating VLDL assembly factor AUP1 isoform X3

    UniProtKB/TrEMBL
    H0W5Z0

  4. XM_063229630.1 → XP_063085700.1  lipid droplet-regulating VLDL assembly factor AUP1 isoform X2

    UniProtKB/TrEMBL
    H0W5Z0
Nucleotide Protein
Heading Accession and Version

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