U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Sbds SBDS ribosome maturation factor [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100734229, updated on 8-Mar-2024
Gene symbol
Sbds
Gene description
SBDS ribosome maturation factor
See related
Ensembl:ENSCPOG00000036143
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See Sbds in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947506.1 (55720580..55726622, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176353.1 (3771777..3777838, complement)

NW_026947506.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 Neighboring gene transmembrane protein 248 Neighboring gene uncharacterized LOC134472553 Neighboring gene uncharacterized LOC134472554 Neighboring gene calneuron 1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cytosolic ribosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
ribosome maturation protein SBDS
Names
SBDS, ribosome assembly guanine nucleotide exchange factor

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947506.1 Reference mCavPor4.1

    Range
    55720580..55726622 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003465767.5 → XP_003465815.1  ribosome maturation protein SBDS

    See identical proteins and their annotated locations for XP_003465815.1

    UniProtKB/TrEMBL
    A0A286XSI9
    Related
    ENSCPOP00000028484.1
    Conserved Domains (3) summary
    COG1500
    Location:9 → 241
    Sdo1; Ribosome maturation protein Sdo1 [Translation, ribosomal structure and biogenesis]
    pfam01172
    Location:17 → 98
    SBDS; Shwachman-Bodian-Diamond syndrome (SBDS) protein
    pfam09377
    Location:107 → 224
    SBDS_C; SBDS protein C-terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials