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LOC100720073 ATP-dependent RNA helicase DDX19A [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100720073, updated on 29-Feb-2024
Gene symbol
LOC100720073
Gene description
ATP-dependent RNA helicase DDX19A
See related
Ensembl:ENSCPOG00000006743
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Also known as
Ddx19a
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See LOC100720073 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947487.1 (105910412..105937199, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176397.1 (3034772..3061748)

NW_026947487.1Genomic Context describing neighboring genes Neighboring gene component of oligomeric golgi complex 4 Neighboring gene fucose kinase Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 2 Neighboring gene small Cajal body-specific RNA 1 Neighboring gene ATP-dependent RNA helicase DDX19B Neighboring gene alanyl-tRNA synthetase 1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in poly(A)+ mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
ATP-dependent RNA helicase DDX19A
Names
DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947487.1 Reference mCavPor4.1

    Range
    105910412..105937199 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003472125.5 → XP_003472173.1  ATP-dependent RNA helicase DDX19A

    UniProtKB/TrEMBL
    A0A286XJZ3, H0V8H2
    Related
    ENSCPOP00000025736.1
    Conserved Domains (3) summary
    PTZ00424
    Location:90 → 468
    PTZ00424; helicase 45; Provisional
    cd00079
    Location:306 → 441
    HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...
    cl21455
    Location:93 → 295
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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Molecular Biology Databases
Research Materials