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Gtf2f2 general transcription factor IIF subunit 2 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100715926, updated on 8-Mar-2024
Gene symbol
Gtf2f2
Gene description
general transcription factor IIF subunit 2
See related
Ensembl:ENSCPOG00000009342
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
all
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See Gtf2f2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947504.1 (60588832..60751252)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176413.1 (55319429..55481914)

NW_026947504.1Genomic Context describing neighboring genes Neighboring gene GPALPP motifs containing 1 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene small nucleolar RNA SNORA2/SNORA34 family Neighboring gene potassium channel tetramerization domain containing 4 Neighboring gene small nucleolar RNA SNORA2/SNORA34 family Neighboring gene uncharacterized LOC111753709

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
general transcription factor IIF subunit 2

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947504.1 Reference mCavPor4.1

    Range
    60588832..60751252
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003477472.5 → XP_003477520.1  general transcription factor IIF subunit 2 isoform X1

    UniProtKB/TrEMBL
    A0A286XX17, H0VEE4
    Related
    ENSCPOP00000030088.1
    Conserved Domains (1) summary
    pfam02270
    Location:13 → 236
    TFIIF_beta; Transcription initiation factor IIF, beta subunit

  2. XM_063232753.1 → XP_063088823.1  general transcription factor IIF subunit 2 isoform X2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials