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Scn9a sodium voltage-gated channel alpha subunit 9 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100714438, updated on 27-Jun-2018

Summary

Gene symbol
Scn9a
Gene description
sodium voltage-gated channel alpha subunit 9
See related
Ensembl:ENSCPOG00000013017
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs

Genomic context

See Scn9a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
103 current Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176416.1 (22695746..22836165)

NT_176416.1Genomic Context describing neighboring genes Neighboring gene xin actin-binding repeat-containing protein 2 Neighboring gene U6 spliceosomal RNA Neighboring gene sodium voltage-gated channel alpha subunit 7 Neighboring gene uncharacterized LOC106025441 Neighboring gene sodium channel protein type 1 subunit alpha Neighboring gene tetratricopeptide repeat domain 21B

Genomic regions, transcripts, and products

Genomic Sequence:
NT_176416 Unplaced Scaffold Reference Cavpor3.0 Primary Assembly

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
sodium channel protein type 9 subunit alpha
Names
Nav1.7 sodium channel protein
sodium channel, voltage-gated, type IX, alpha subunit

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Cavia porcellus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cavpor3.0 Primary Assembly

Genomic

  1. NT_176416.1 Reference Cavpor3.0 Primary Assembly

    Range
    22695746..22836165
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013142433.2XP_012997887.1  sodium channel protein type 9 subunit alpha

    Related
    ENSCPOP00000011719.3, ENSCPOT00000013143.3
    Conserved Domains (5) summary
    cd13433
    Location:14561508
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:12071464
    Ion_trans; Ion transport protein
    pfam06512
    Location:9811185
    Na_trans_assoc; Sodium ion transport-associated
    pfam11933
    Location:487606
    Na_trans_cytopl; Cytoplasmic domain of voltage-gated Na+ ion channel
    pfam16905
    Location:17801835
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated
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