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pou4f2 POU class 4 homeobox 2 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100711667, updated on 5-Sep-2025
Gene symbol
pou4f2
Gene description
POU class 4 homeobox 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Orthologs
all
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See pou4f2 in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
2
Annotation release Status Assembly LG Location
RS_2025_06 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG6 NC_031971.2 (16155120..16159005, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG6 NC_031971.1 (27046628..27050397)

Linkage Group LG6 - NC_031971.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106098556 Neighboring gene transmembrane protein 184C Neighboring gene endothelin receptor type Aa Neighboring gene LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated Neighboring gene zinc finger protein 827

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
POU domain, class 4, transcription factor 2
XP_003449720.2

Length

  • 382

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RefSeqs of Annotated Genomes: GCF_001858045.2-RS_2025_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031971.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    16155120..16159005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003449672.5 → XP_003449720.2  POU domain, class 4, transcription factor 2

    UniProtKB/TrEMBL
    A0A669BX34
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases