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lmnb2 lamin B2 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100709615, updated on 12-Sep-2018

Summary

Gene symbol
lmnb2
Gene description
lamin B2
See related
Ensembl:ENSONIG00000007739
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Broad expression in skin (RPKM 28.3), whole embryo (RPKM 20.4) and 7 other tissues See more
Orthologs

Genomic context

See lmnb2 in Genome Data Viewer
Location:
chromosome: LG17
Exon count:
13
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG17 NC_031981.2 (24041247..24051625)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG17 NC_031981.1 (25645914..25656301)

Linkage Group LG17 - NC_031981.2Genomic Context describing neighboring genes Neighboring gene phosphodiesterase 6D Neighboring gene ribosomal protein L36 Neighboring gene RNA 3'-terminal phosphate cyclase Neighboring gene cell division cycle 14A

Genomic regions, transcripts, and products

Expression

  • Project title: Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031981.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    24041247..24051625
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003448837.5XP_003448885.1  lamin-B2

    UniProtKB/TrEMBL
    I3JLL0
    Related
    ENSONIP00000009754
    Conserved Domains (2) summary
    pfam00038
    Location:30386
    Filament; Intermediate filament protein
    pfam00932
    Location:438547
    LTD; Lamin Tail Domain
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