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pax1b paired box 1b [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100706214, updated on 5-Sep-2025
Gene symbol
pax1b
Gene description
paired box 1b
See related
Ensembl:ENSONIG00000018717
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Also known as
pax1
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See pax1b in Genome Data Viewer
Location:
chromosome: LG15
Exon count:
5
Annotation release Status Assembly LG Location
RS_2025_06 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG15 NC_031980.2 (23231187..23242201, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG15 NC_031980.1 (8843227..8854196, complement)

Linkage Group LG15 - NC_031980.2Genomic Context describing neighboring genes Neighboring gene CD276 antigen homolog Neighboring gene low affinity immunoglobulin gamma Fc region receptor II-like Neighboring gene NK2 homeobox 2b Neighboring gene NK2 homeobox 4b Neighboring gene 5'-3' exoribonuclease 2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
paired box protein Pax-1
Names
paired box 1
XP_019201874.2

Length

  • 359

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_001858045.2-RS_2025_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031980.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    23231187..23242201 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019346329.2 → XP_019201874.2  paired box protein Pax-1

    Related
    ENSONIP00000023563.2, ENSONIT00000023584.2
    Conserved Domains (1) summary
    cd00131
    Location:5 → 131
    PAX; Paired Box domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases