U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100694795 hydroperoxide isomerase ALOXE3 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100694795, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC100694795
Gene description
hydroperoxide isomerase ALOXE3
See related
Ensembl:ENSONIG00000009404
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC100694795 in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
15
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG6 NC_031971.2 (18369989..18376714)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG6 NC_031971.1 (22516297..22522707, complement)

Linkage Group LG6 - NC_031971.2Genomic Context describing neighboring genes Neighboring gene hydroperoxide isomerase ALOXE3 Neighboring gene arachidonate 12-lipoxygenase, 12R-type Neighboring gene nephronectin a Neighboring gene glutathione S-transferase, C-terminal domain containing Neighboring gene integrator complex subunit 12

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in linoleic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
hydroperoxide isomerase ALOXE3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031971.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    18369989..18376714
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019359969.2 → XP_019215514.1  hydroperoxide isomerase ALOXE3

    UniProtKB/TrEMBL
    A0A669EG30
    Related
    ENSONIP00000070011.1, ENSONIT00000077351.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases