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tmem41b transmembrane protein 41B [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100692333, updated on 12-Sep-2018

Summary

Gene symbol
tmem41b
Gene description
transmembrane protein 41B
See related
Ensembl:ENSONIG00000006079
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Ubiquitous expression in testis (RPKM 10.7), skin (RPKM 6.0) and 9 other tissues See more
Orthologs

Genomic context

See tmem41b in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
7
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG1 NC_031965.2 (20324636..20334630, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG1 NC_031965.1 (18909173..18919164, complement)

Linkage Group LG1 - NC_031965.2Genomic Context describing neighboring genes Neighboring gene SIN3-HDAC complex-associated factor Neighboring gene DENN domain containing 5A Neighboring gene importin 7 Neighboring gene switching B cell complex subunit SWAP70

Genomic regions, transcripts, and products

Expression

  • Project title: Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031965.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    20324636..20334630 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003442286.5XP_003442334.1  transmembrane protein 41B

    UniProtKB/TrEMBL
    I3JFL6
    Related
    ENSONIP00000007657
    Conserved Domains (1) summary
    pfam09335
    Location:121240
    SNARE_assoc; SNARE associated Golgi protein
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