Cbx1 chromobox 1 [Cricetulus griseus (Chinese hamster)] - Gene

Summary

Gene symbol: Cbx1
Gene description: chromobox 1
Locus tag: I79_005678
See related: Ensembl:ENSCGRG00015019803
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Cricetulus griseus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information: Annotation category: partial on reference assembly
Orthologs: all
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Genomic context

Location:: chromosome: 7

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
104	current	CriGri_1.0 (GCF_000223135.1)	Unplaced Scaffold	NW_003613745.1 (619094..637494)
104	current	CriGri-PICRH-1.0 (GCF_003668045.3)	7	NC_048600.1 (109941225..109959996)

NW_003613745.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

Cbx1 (e-PCR), detects polymorphism
- UniSTS:141250

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables chromatin binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in chromatin organization	IEA Inferred from Electronic Annotation more info	PubMed
involved_in negative regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed
part_of pericentric heterochromatin	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: chromobox protein homolog 1

Names: Chromobox protein-like 1; chromobox homolog 1; heterochromatin protein 1 beta

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001246787.1 → NP_001233716.1 chromobox protein homolog 1

See identical proteins and their annotated locations for NP_001233716.1

Status: PROVISIONAL

Source sequence(s)

AY548739

UniProtKB/TrEMBL

A0A9J7HVI9, Q6E6J7

Related

ENSCGRP00015026142.1, ENSCGRT00015032033.2

Conserved Domains (2) summary

cd18650
Location:20 → 69

CD_HP1beta_Cbx1; chromodomain of heterochromatin protein 1 homolog beta

cd18654
Location:112 → 169

CSD_HP1beta_Cbx1; chromo shadow domain of heterochromatin protein 1 homolog beta