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Slc26a6 solute carrier family 26 member 6 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100689283, updated on 18-Sep-2024

Summary

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Gene symbol
Slc26a6
Gene description
solute carrier family 26 member 6
See related
Ensembl:ENSCPOG00000033409
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Slc26a6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947488.1 (51972307..51981839, complement)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176411.1 (23836918..23846294, complement)

NW_026947488.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134476079 Neighboring gene transmembrane protein 89 Neighboring gene cadherin EGF LAG seven-pass G-type receptor 3 Neighboring gene NCK interacting protein with SH3 domain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SLC26 anion exchangers of guinea pig pancreatic duct: molecular cloning and functional characterization. Stewart AK, et al. Am J Physiol Cell Physiol, 2011 Aug. PMID 21593449, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables bicarbonate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chloride transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxalate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables secondary active sulfate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 26 member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001246663.1 → NP_001233592.1  solute carrier family 26 member 6

    See identical proteins and their annotated locations for NP_001233592.1

    Status: PROVISIONAL

    Source sequence(s)
    GU722137
    UniProtKB/TrEMBL
    G3C7W4
    Conserved Domains (2) summary
    cd07042
    Location:645 → 722
    STAS_SulP_like_sulfate_transporter; Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function
    TIGR00815
    Location:71 → 725
    sulP; high affinity sulphate transporter 1

RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947488.1 Reference mCavPor4.1

    Range
    51972307..51981839 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023560019.2 → XP_023415787.1  solute carrier family 26 member 6 isoform X2

    Conserved Domains (1) summary
    cl28030
    Location:71 → 704
    Sulfate_transp; Sulfate permease family

  2. XM_013159556.3 → XP_013015010.1  solute carrier family 26 member 6 isoform X1

    See identical proteins and their annotated locations for XP_013015010.1

    UniProtKB/TrEMBL
    A0A286XVZ6
    Conserved Domains (2) summary
    cd07042
    Location:624 → 701
    STAS_SulP_like_sulfate_transporter; Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function
    TIGR00815
    Location:50 → 704
    sulP; high affinity sulphate transporter 1

  3. XM_005006544.4 → XP_005006601.1  solute carrier family 26 member 6 isoform X1

    See identical proteins and their annotated locations for XP_005006601.1

    UniProtKB/TrEMBL
    A0A286XVZ6
    Related
    ENSCPOP00000029502.1
    Conserved Domains (2) summary
    cd07042
    Location:624 → 701
    STAS_SulP_like_sulfate_transporter; Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function
    TIGR00815
    Location:50 → 704
    sulP; high affinity sulphate transporter 1
Nucleotide Protein
Heading Accession and Version

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