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Pisd phosphatidylserine decarboxylase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100689093, updated on 8-Mar-2024
Gene symbol
Pisd
Gene description
phosphatidylserine decarboxylase
Locus tag
I79_011111
See related
Ensembl:ENSCGRG00015027514
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Pssc
Orthologs
all
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Try the new Transcripts and proteins table
See Pisd in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614033.1 (1274417..1319092)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (101789786..101834357, complement)

NW_003614033.1Genomic Context describing neighboring genes Neighboring gene DEP domain containing 5, GATOR1 subcomplex subunit Neighboring gene U6 spliceosomal RNA Neighboring gene proline rich 14 like Neighboring gene uncharacterized LOC103161182 Neighboring gene protein SFI1 homolog

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. A cloned gene encoding phosphatidylserine decarboxylase complements the phosphatidylserine biosynthetic defect of a Chinese hamster ovary cell mutant. Kuge O, et al. J Biol Chem, 1991 Apr 5. PMID 2007589
  2. Post-translational processing of the phosphatidylserine decarboxylase gene product in Chinese hamster ovary cells. Kuge O, et al. Biochem J, 1996 Oct 1. PMID 8870646, Free PMC Article
  3. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
  4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylserine decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylethanolamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
phosphatidylserine decarboxylase proenzyme, mitochondrial
Names
Phosphatidylserine decarboxylase proenzyme, mitochondrial
phosphatidylserine decarboxylase proenzyme

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614033.1 Reference CriGri_1.0 Primary Assembly

    Range
    1274417..1319092
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007644645.4 → XP_007642835.1  phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_007642835.1

    UniProtKB/TrEMBL
    A0A9J7EYZ9
    Conserved Domains (1) summary
    pfam02666
    Location:189 → 425
    PS_Dcarbxylase; Phosphatidylserine decarboxylase

  2. XM_003504120.5 → XP_003504168.1  phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X2

    See identical proteins and their annotated locations for XP_003504168.1

    UniProtKB/Swiss-Prot
    P27465, Q64402
    UniProtKB/TrEMBL
    A0A9J7J1M8
    Conserved Domains (1) summary
    pfam02666
    Location:171 → 407
    PS_Dcarbxylase; Phosphatidylserine decarboxylase

  3. XM_027437775.2 → XP_027293576.1  phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A8C2N1S3
    Conserved Domains (1) summary
    PLN02938
    Location:80 → 373
    PLN02938; phosphatidylserine decarboxylase

  4. XM_016976477.2 → XP_016831966.1  phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A9J7EZQ6

  5. XM_007644646.4 → XP_007642836.1  phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X3

    See identical proteins and their annotated locations for XP_007642836.1

    UniProtKB/TrEMBL
    A0A8C2N1S3
    Conserved Domains (1) summary
    PLN02938
    Location:80 → 373
    PLN02938; phosphatidylserine decarboxylase

  6. XM_007644647.4 → XP_007642837.1  phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X3

    See identical proteins and their annotated locations for XP_007642837.1

    UniProtKB/TrEMBL
    A0A8C2N1S3
    Conserved Domains (1) summary
    PLN02938
    Location:80 → 373
    PLN02938; phosphatidylserine decarboxylase

  7. XM_003504121.5 → XP_003504169.1  phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X3

    See identical proteins and their annotated locations for XP_003504169.1

    UniProtKB/TrEMBL
    A0A8C2N1S3
    Conserved Domains (1) summary
    PLN02938
    Location:80 → 373
    PLN02938; phosphatidylserine decarboxylase

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276807.1 Alternate CriGri-PICRH-1.0

    Range
    101789786..101834357 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027387248.2 → XP_027243049.1  phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X2

    UniProtKB/Swiss-Prot
    P27465, Q64402
    UniProtKB/TrEMBL
    A0A9J7J1M8
    Related
    ENSCGRP00015039061.1, ENSCGRT00015056414.1

  2. XM_027387247.2 → XP_027243048.1  phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A9J7EYZ9
    Related
    ENSCGRP00015057280.1, ENSCGRT00015066844.1

  3. XM_027387252.2 → XP_027243053.1  phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A8C2N1S3
    Related
    ENSCGRP00015036696.1, ENSCGRT00015044746.2
    Conserved Domains (1) summary
    PLN02938
    Location:80 → 373
    PLN02938; phosphatidylserine decarboxylase

  4. XM_027387253.1 → XP_027243054.1  phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A9J7EZQ6

  5. XM_027387249.2 → XP_027243050.1  phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A8C2N1S3
    Conserved Domains (1) summary
    PLN02938
    Location:80 → 373
    PLN02938; phosphatidylserine decarboxylase

  6. XM_027387250.2 → XP_027243051.1  phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A8C2N1S3
    Conserved Domains (1) summary
    PLN02938
    Location:80 → 373
    PLN02938; phosphatidylserine decarboxylase

  7. XM_035452252.1 → XP_035308143.1  phosphatidylserine decarboxylase proenzyme, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A8C2N1S3
    Conserved Domains (1) summary
    PLN02938
    Location:80 → 373
    PLN02938; phosphatidylserine decarboxylase
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P27465.2 GenPept UniProtKB/Swiss-Prot:P27465

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