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Eef2 eukaryotic translation elongation factor 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100689051, updated on 27-Jan-2018

Summary

Gene symbol
Eef2
Gene description
eukaryotic translation elongation factor 2
Locus tag
I79_013848
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Ef2; EF-2
Annotation information
Annotation category: partial on reference assembly
Orthologs

Genomic context

See Eef2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614244.1 (681863..686420, complement)

NW_003614244.1Genomic Context describing neighboring genes Neighboring gene nicotinamide riboside kinase 2 Neighboring gene death associated protein kinase 3 Neighboring gene protein inhibitor of activated STAT 4 Neighboring gene zinc finger and BTB domain containing 7A

Genomic regions, transcripts, and products

Pathways from BioSystems

  • AMPK signaling pathway, organism-specific biosystem (from KEGG)
    AMPK signaling pathway, organism-specific biosystemAMP-activated protein kinase (AMPK) is a serine threonine kinase that is highly conserved through evolution. AMPK system acts as a sensor of cellular energy status. It is activated by increases in th...
  • AMPK signaling pathway, conserved biosystem (from KEGG)
    AMPK signaling pathway, conserved biosystemAMP-activated protein kinase (AMPK) is a serine threonine kinase that is highly conserved through evolution. AMPK system acts as a sensor of cellular energy status. It is activated by increases in th...
  • Oxytocin signaling pathway, organism-specific biosystem (from KEGG)
    Oxytocin signaling pathway, organism-specific biosystemOxytocin (OT) is a nonapeptide synthesized by the magno-cellular neurons located in the supraoptic (SON) and paraventricular (PVN) nuclei of the hypothalamus. It exerts a wide variety of central and ...
  • Oxytocin signaling pathway, conserved biosystem (from KEGG)
    Oxytocin signaling pathway, conserved biosystemOxytocin (OT) is a nonapeptide synthesized by the magno-cellular neurons located in the supraoptic (SON) and paraventricular (PVN) nuclei of the hypothalamus. It exerts a wide variety of central and ...

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001244039.1NP_001230968.1  elongation factor 2

    See identical proteins and their annotated locations for NP_001230968.1

    Status: PROVISIONAL

    Source sequence(s)
    M13708
    UniProtKB/Swiss-Prot
    P09445
    Conserved Domains (6) summary
    cd01885
    Location:20233
    EF2; Elongation Factor 2 (EF2) in archaea and eukarya
    cd01681
    Location:574746
    aeEF2_snRNP_like_IV; This family represents domain IV of archaeal and eukaryotic elongation factor 2 (aeEF-2) and of an evolutionarily conserved U5 snRNP-specific protein. U5 snRNP is a GTP-binding factor closely related to the ribosomal translocase EF-2. In complex with GTP, ...
    cd04096
    Location:742821
    eEF2_snRNP_like_C; eEF2_snRNP_like_C: this family represents a C-terminal domain of eukaryotic elongation factor 2 (eEF-2) and a homologous domain of the spliceosomal human 116kD U5 small nuclear ribonucleoprotein (snRNP) protein (U5-116 kD) and, its yeast counterpart ...
    PTZ00416
    Location:1858
    PTZ00416; elongation factor 2; Provisional
    cd03700
    Location:394488
    EF2_snRNP_like_II; Domain II of elongation factor 2 and C-terminal domain of the spliceosomal human 116kD U5 small nuclear ribonucleoprotein (snRNP) protein
    cd16261
    Location:503574
    EF2_snRNP_III; Domain III of Elongation Factor 2 (EF2)

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614244.1 Reference CriGri_1.0 Primary Assembly

    Range
    681863..686420 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate C_griseus_v1.0

Genomic

  1. NW_006883072.1 Alternate C_griseus_v1.0

    Range
    103332..107889
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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